Gene Information

Name : PP1Y_Spl367 (PP1Y_Spl367)
Accession : YP_004537958.1
Strain :
Genome accession: NC_015582
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB4
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 36230 - 38596 bp
Length : 2367 bp
Strand : -
Note : assigned by KAAS to KEGG Orthology:K03199 type IV secretion system protein VirB4

DNA sequence :
ATGACTAGGTTCGCCCTCAAGCACAAACAGGTCGCATTGCGCGAAGAGGATGACATCAAGTTCATCCCCTACACCCGGCA
CGTCAACGACACCGTGATTGCGCTGGCCGATGGCTCGCTCATGCGCATGTACCGGGTCGATGGCCGTCCGTTCGAGACCT
GCGACATTGCCGACCTCAACACCTGGCACAACAAGCTCAATATCGCCTGGCGCACGATCGGCGATGACCGGGTGGCCGTG
TGGACGCACCTGGTGCGCACCGCCACCAATCCCGAACTGGACGGCGAGTTTCAGTCCGACTTCGCGCGCGACTTGCAGGC
CAGGTACTCCGAGCGCCTCAAGGAAAAGGTGCTCTACCACAATGAGTTCTACGTCACGATCGTGGTGCGCCCCTCGAACA
TGGCCGGTGACCAGCTCGGCCGCCTGTTCGGCAAGGCCGATGCCAGCCAGGCCGCCGACGATCGCGCGCTGGCTATCATG
GCCGACAAGTGCCGCGACTTCGAGAGCATGCTGGCCGATACCAACCCGGTGGCGCTCTCGCTCTACGAGCGCGGCGGCGT
TCTGTTTTCGCAGCCCATGGAAGTGCTGCACTTCATCCAGACCGGGGACCGTATTCGCATCCCGCTCGTCCGCGGTCGGC
TCGGACAGGCGATCTACAATTCGCGGATCATCTTCGGGCGCGAGGCGGCCGAGATTCGCCTTCCCGACAGGTCGCATTAC
CTGGGCATGTTCGGGGTGCGCGAGTACGTCGCGAACACGCGCAGCGGCCAGTTCAACAGCCTTCTGACGCTCGATTTCCC
CTATGTGCTGACGCAAAGCTTCGCGCCGCTGGTCAAGTCGGTCGCGGCCGAGCGCTTCCAGAAGAAGTACAAGCAGATGG
TCTCCTCGGACGATGCTGGCGTAAGCCAGGCCGAAGAGTTGCTCGATGGCGTCGATGACCTCATGTCGAACCGCTTCGTC
ATGGGCGAGCATCACCTCTCGATTGCCGTGATCGACGATAATCCCAAGCGCCTGCTCGAACGCCTCTCGATCGCCCGCGC
CGCCGCAGCCGATACCGGCATGGTCATGGCGCGCGAGGACGTCGCGCTGGAAGCCGCGTTCTGGGCGCAGCTTCCCGGCA
ACTTCAGGATGCGGGCGCGGCCCGCCGTGATCAACAGCCGCAATTTCGCGGCGATGAGCCCGTTTCATACCTTCCCTGCG
GGTCGCAAGTCGGGGAACCACTGGGGCGAGGCGGTGACGCTCTTGAAAACGCGCGCGGGCTCGTCCTTCTGGTTCAATTT
CCACCGCGCCGACATTGGCCACACGCTCATCATCGGCCCCACCGGCGGGGGCAAGACGGTCCTGCAGAACTTCCTGCTCG
CCCAGCTCGAAAAAACCGGCGCCAAGCAGATTTTCTTCGACAAGGACCGGGGCGCGGAGATCTTCATGCGCGCCTGCGGC
GGAACCTACCTGGCCCTGCGCAACGGCGAGCCGACCGGCTTTGCCCCGCTCAAGGGGCTGGAGCCGACCCACGACAACAT
GGCGTTTCTGCGCCAGTTCATCCGCGTCCTGGTCCGGCGCGACAACCGGCCCCTCACCGTCACCCAGGAGCGCACCATCG
ACGAGGGCCTCGATGCCGTGATGCGTCTTCCTGCCACGCAACGCTCGATGAGCGCGCTTCGCGAAATGCTCGGCTATGCC
GATGCCGAAGGCATTGGCGCTCGCCTCGAGCGCTGGTGCCGGGGCGGCGCGCTCGGATGGGCTTTCGATGGCCCGGCCGA
TGAGGTCTCGATGGCGGCCCGCTTCGTCGGTTTCGACATGACGGACTTTCTCGAAAATCCCGAAATCCGCACGCCGATGA
TGCTCTACCTCTTCCACCGCGTGGATGAGCTGCTGAATGGCCAGCGCGTCGTCGTCGACATCGACGAGTTCTGGAAGGCT
CTGCAGGACGATGCCTTCAAGTCGTTCGCACAGGACGGCCTCAAGACCTTCCGCAAGCGCAACGCCTTCATGGTCTTTGG
CACGCAGTCGCCCGCCGATGCGCTGCGCTCCTCGATCGCGCATTCGATCATCGAGCAGACCGCGACCAAGATCCTCCTGC
CCAACTCCGATGCCAAGCGTTCGGACTACTGCGAGGGCCTCGGCCTCACGGAGGCGGAATTTAGGCTGATCAAGGAAGAC
CTGACACCCGAAAGCCGGTGTTTCCTCATCAAGCAAGGGCACACCTCGATCGTCGCCAAGCTCGATCTGAACGGGATGCT
CGACGAGCTTTCGGTTCTCTCCGGCCGTGCGGAAACGCTGGAGGTCATGGAGGCTGCCATTGCTGAGGCGGGCACCGATC
CGGCGGCCTGGCTGCCGCTCTTCTACGCCAGTGAAAGGAGAAGCTGA

Protein sequence :
MTRFALKHKQVALREEDDIKFIPYTRHVNDTVIALADGSLMRMYRVDGRPFETCDIADLNTWHNKLNIAWRTIGDDRVAV
WTHLVRTATNPELDGEFQSDFARDLQARYSERLKEKVLYHNEFYVTIVVRPSNMAGDQLGRLFGKADASQAADDRALAIM
ADKCRDFESMLADTNPVALSLYERGGVLFSQPMEVLHFIQTGDRIRIPLVRGRLGQAIYNSRIIFGREAAEIRLPDRSHY
LGMFGVREYVANTRSGQFNSLLTLDFPYVLTQSFAPLVKSVAAERFQKKYKQMVSSDDAGVSQAEELLDGVDDLMSNRFV
MGEHHLSIAVIDDNPKRLLERLSIARAAAADTGMVMAREDVALEAAFWAQLPGNFRMRARPAVINSRNFAAMSPFHTFPA
GRKSGNHWGEAVTLLKTRAGSSFWFNFHRADIGHTLIIGPTGGGKTVLQNFLLAQLEKTGAKQIFFDKDRGAEIFMRACG
GTYLALRNGEPTGFAPLKGLEPTHDNMAFLRQFIRVLVRRDNRPLTVTQERTIDEGLDAVMRLPATQRSMSALREMLGYA
DAEGIGARLERWCRGGALGWAFDGPADEVSMAARFVGFDMTDFLENPEIRTPMMLYLFHRVDELLNGQRVVVDIDEFWKA
LQDDAFKSFAQDGLKTFRKRNAFMVFGTQSPADALRSSIAHSIIEQTATKILLPNSDAKRSDYCEGLGLTEAEFRLIKED
LTPESRCFLIKQGHTSIVAKLDLNGMLDELSVLSGRAETLEVMEAAIAEAGTDPAAWLPLFYASERRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB4 YP_001610000.1 VirB4 protein Virulence Not named Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP1Y_Spl367 YP_004537958.1 type IV secretion system protein VirB4 VFG2233 Protein 2e-179 49