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Name : Thicy_0852 (Thicy_0852) Accession : YP_004537103.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Unknown Product : Nickel-transporting ATPase Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : 3.6.3.24 Position : 1003182 - 1004792 bp Length : 1611 bp Strand : - Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: tcx:Tcr_1185 ABC transporter related; SMART: ATPase, AAA+ type, core DNA sequence : ATGAAAAATCCGGTTTTAGCAATTGAGAATTTAGTAGTAAATGTCGGCGATAATGCGCTGATTGATGGTATTAGCTTGCA AATTCAGCCGGGTGAGATTTTTGCTTTGGTTGGCGAGTCGGGTAGTGGTAAATCTCTAACATCATTAGCGGTGATGCGCT TGTTACCCGATGCGCTGCGCATTGAAGTGGGCGATATTCAGCTGCACAACCAGTCTTTGCTGAACTTAACCGAAGCCCAA ATGCAAAAGGTGCGCGGCAAGTCGATTGCGATGATATTCCAAGAGCCGATGACCTCACTCAACCCAGTCATGCGTGTGGG GGATCAAGTGGCTGAAGTGTTGCGCGTGCATTTAGGTCTATCCTCAAAAGCCGCCCAAGCCAAAGCGATTGATTTATTCA ACGAAGTGGGCATTCCAGAGGCTGAACAACGCATTAATTGGTATCCGCACCAACTATCTGGTGGTCAAAAACAACGGGTG ATGATTGCGATGGCACTGGCGTGCGAACCGGATTTATTAATCGCCGACGAACCGACCACGGCGTTGGATGTCACCATTCA AGCCCAAGTATTAAAACTGCTGAAGAAACTGCGTGATGAACGGGGTTTATCTATTTTGTTTATCACCCACGATATGGGTG TTGTCGCTGAAATGGCCGACCGTGTGGCGGTGATGCAAAAAGGCCGGATTGTCGAAACGGCCGAAGTTGAGCACTTTATT AAAGCGCCAACCCACCCCTATACCCAACAGCTGCTTGCCGATGCCTTGCCACAGCGTAACTACAAACCCCTACAAACCAA TGAGTCCTTGCTGGATTTACGCGGTTTAAAAGTCCATTTCCCGATTAAGAAGGGCATATTGCAGCGCACGGTTGGCTATG TAAAAGCTGTTGATGGGGTTGATTTAGTGATTCGACGTGGTGAAACCCTTGCGCTGGTAGGTGAATCGGGCAGCGGAAAA AGCACCATTGGCCAAGCCATTCTGCGGTTAATCGACAGCACCGAAGGCGAAATCCGTTATCAAGACGTTAATCTCGCACA ACTCAATGAACGCAAAATAAAACCTTTGCGCAAAAAAATACAGGTGATTTTCCAAGACCCTTATTCGGCGCTAAATCCAC GCATGACCATCGGTGAAATCATTCGGGAGGGCATGGTCAGCTTAAAAGTCGGCTCGCAAAACAAAGCCGATCAAAATCAG CGCATTGACGAACTGCTCCAACAAGTCGGGCTATTAGCGGAGCACAAAATGCGCTACCCGCACGAATTCTCTGGCGGCCA GCGCCAACGCATTGGTATCGCCCGCGCCCTAGCGGTTGAGCCAGAATTAATTATCTGCGACGAACCCACCAGCGCACTAG ACGTCACCGTGCGCGCGCAAGTATTAGATTTGCTCAACCACCTGCAGAAAACCTACAATCTATCGCTATTATTTATCACC CACGATTTATCCATCATCCCGCGTATCGCGCATCGCGTAGCTGTTATGTCCGAAGGCAAAATCGTCGAGCAGGGCGACGT CCAATCCATCCTCGAAAACCCACAACACATCTACACCCAAACCCTGCTAGCCGCTGCGCCGAGTTTTCATGATATGAGGC AGAGTTTGTAA Protein sequence : MKNPVLAIENLVVNVGDNALIDGISLQIQPGEIFALVGESGSGKSLTSLAVMRLLPDALRIEVGDIQLHNQSLLNLTEAQ MQKVRGKSIAMIFQEPMTSLNPVMRVGDQVAEVLRVHLGLSSKAAQAKAIDLFNEVGIPEAEQRINWYPHQLSGGQKQRV MIAMALACEPDLLIADEPTTALDVTIQAQVLKLLKKLRDERGLSILFITHDMGVVAEMADRVAVMQKGRIVETAEVEHFI KAPTHPYTQQLLADALPQRNYKPLQTNESLLDLRGLKVHFPIKKGILQRTVGYVKAVDGVDLVIRRGETLALVGESGSGK STIGQAILRLIDSTEGEIRYQDVNLAQLNERKIKPLRKKIQVIFQDPYSALNPRMTIGEIIREGMVSLKVGSQNKADQNQ RIDELLQQVGLLAEHKMRYPHEFSGGQRQRIGIARALAVEPELIICDEPTSALDVTVRAQVLDLLNHLQKTYNLSLLFIT HDLSIIPRIAHRVAVMSEGKIVEQGDVQSILENPQHIYTQTLLAAAPSFHDMRQSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-93 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-93 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-93 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-93 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-99 | 42 |
