|
Name : Thicy_0841 (Thicy_0841) Accession : YP_004537092.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 993185 - 994528 bp Length : 1344 bp Strand : - Note : KEGG: tcx:Tcr_0859 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like DNA sequence : ATGGCGGTCTTTGCATTGGTAGATGCGAACAGTTTTTATGCGTCTTGTGAAATTTCATTTCGGCCAGATCTTGCCAAACG CCCGGTGGTGGTGTTGTCTAATAATGACGGCTGTATAGTGGCGGCCAATCAAATAGCCAAGGATTTAGTAAAGCGGCATG CACGTGACTATGGTCAGGGTGGTTATGCATCGGCAACACCCGCTAGTATGATGTTTCAGCCTTATTTTAAGGTGGCTGAC CTACTTGAGCGTTATAACACCGCGGTTTTTAGCTCGAATTATGAATTGTATGGCGATATGAGTACGCGGATGCATCAGTT ATTGGGTGAGTATGCGGCGGGACAAGAAATTTATTCGATTGATGAATCTTTTTTAGATTGGTCAGGGATGTCGGCGTGGG ATTTAACCGCCTATGCGCAGATGATTCGCGACAAAATTAAACAAGGTCTAGGTCTGCCCGTGGCGGTGGGGGTTGGTGCT TCCAAAACCTTAGCAAAACTGGCCAATAATCTGGCCAAAAAACAACCGGCTTTTGATGGGGTGCTAGATTTAACTGCAGT GAGCTCCGCGACTCGAACGGCGTTGTTAAAACAAGTGCCTGTGGGTGATGTTTGGGGAGTGGGGCGACGCATGGCTCCTA AGTTACAGGCGCTGAATATTCAGAGCGCCTATGATTTACAACAGGCCGATGCTAAGACCTTACGGCGTCATTTTTCGGTG GTGATGGAGCGTTTGATTGCCGAGTTGAACGGAGAAAGTTGTTTAGCACTCGAAATGGTGGCACCGGCAAAACAGCAAAT TATTCGTTCACGTTCGTTTGGTCAACCGGTGATGGAATGGGATTGGCTGGCTCAGGCCGTGGCGAGTTATACCGCGCGTG CGGCGGAAAAGCTGCGTCAGCAAGGCTCGGTGTGTCAGCATATTCATGTGCACTTGCGAACCAATCCTTATGATACGAAA CAGCCTTATTATGCTAACTCGCATGGCATGGGGTTGGTTTATCCCACCGATAATAGTCAGTTGTTGATTAAGCTAGCAAA ACGCTTACTCAAGCGGGTTTGGCAACCAGGCCTGGCGTATCACAAAGCCGCTGTAACCCTTTCGGCGATAAGTGATAAAG GACCGTTGCAATTAGATGCTTTTGCGCCCAATCCTAGGTTTTCAGCTAACCCCAAAGCAGAAGCTTTGATGACGACGTTG GATGCGATTAATCAAAAAATGGGTCGCGGGTCGATTCAGTTTGCCGCCGAAGGCTTGGCGGATAAGGCGCAGTGGGCGAT GCGTCGCGCGAAATGCTCGCCGCGTTATACCACACGGTTTGATGAAATTTTGGTGGTGCATTAA Protein sequence : MAVFALVDANSFYASCEISFRPDLAKRPVVVLSNNDGCIVAANQIAKDLVKRHARDYGQGGYASATPASMMFQPYFKVAD LLERYNTAVFSSNYELYGDMSTRMHQLLGEYAAGQEIYSIDESFLDWSGMSAWDLTAYAQMIRDKIKQGLGLPVAVGVGA SKTLAKLANNLAKKQPAFDGVLDLTAVSSATRTALLKQVPVGDVWGVGRRMAPKLQALNIQSAYDLQQADAKTLRRHFSV VMERLIAELNGESCLALEMVAPAKQQIIRSRSFGQPVMEWDWLAQAVASYTARAAEKLRQQGSVCQHIHVHLRTNPYDTK QPYYANSHGMGLVYPTDNSQLLIKLAKRLLKRVWQPGLAYHKAAVTLSAISDKGPLQLDAFAPNPRFSANPKAEALMTTL DAINQKMGRGSIQFAAEGLADKAQWAMRRAKCSPRYTTRFDEILVVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-58 | 45 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 1e-66 | 42 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 1e-66 | 42 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-71 | 42 |
