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Name : Thicy_0827 (Thicy_0827) Accession : YP_004537078.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 974253 - 975773 bp Length : 1521 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: tcx:Tcr_0726 lysyl-tRNA synthetase DNA sequence : ATGTCAGAACAGCAATCAACATCTTCAAACACGCCTGAGCTAGACGAAAACAAAATCATTGCCGAGCGCCGCGCCAAATT AGACGGCTTGCGTCAAGCAGGGCAGGCTTATCCGAATACCTTCCGTCGTGATGTGTTAGCACAGGATTTACAAAGCACCT ACGGCGATAAAACCAAAGATGAGTTAGCCGCCATGGAGCCGGTGCGTGTAAAGGTTGCCGGCCGCATGATGTTGCGTCGC ATTATGGGTAAAGCCAGCTTTGCCACCTTGCAAGATATGAGCGGTCGTATTCAAGCCTATGTTACTCGTGATGAATTGCC GGAAGGTTTTTACAACGAGCAATTTAAAAGATGGGATTTGGGCGACATCGTTGGAGTGAGTGGGTATTTGTTTAAAACCA ATACTGATGAATTATCGATTCACGTTGAATCGATTGAGCTGATAACCAAGGCTTTGCGCCCACTACCGGATAAGTTCCAT GGTTTGCAAGATCAAGAAGTCCGTTATCGCCAGCGTTACCTAGACTTGATTATGTCTGAGCAAAGCCGCAGAACCTTTGA AACCCGCTCAAAAGTGATTCATGCGATGCGTGAATTTTTTGTGCGTAAAGGCTTTATGGAAGTCGAAACCCCAATGATGC AGGTGATTCCGGGCGGCGCATCGGCGAAGCCCTTTGTGACCCACCACAATGCGTTGGATATGCCGCTGTATTTGCGTATT GCGCCAGAGCTTTACCTTAAGCGTTTGTTGGTCGGTGGCTTTGAAAAGGTGTTTGAGATTAACCGTAATTTCCGCAATGA AGGCTTGTCCACCCGCCATAACCCGGAGTTCACCATGGTCGAGTTTTATGAGGCCTATGCCGACTACATCGATATGATGG ATTACACCGAAGAGATGTTTAAAGAATTGGCTCAGATGGTACTGGGTTCTGGCCAGGTTCCTTATCAAGGTCAAGTATTT CACTTTGATAAGCCGTTTGCCCGAATCACCATGAAAGATTCGATTGCCCTGTATAACGAAGGTGTGAAGGTTGAAGACCT TGATGACATCGAATATTGCATTTCGTTAGCGGAAAAACTAAAAATCGACATCAGGCCTGGTTATGGCTTAGGCAAAATTC AAACCGAGATTTTCGAAGAAACCGTTGAACATCGTTTAATGGACCCGACCTTTATCACCGAGTATCCAGCGGAAGTATCA CCGCTTGCACGTCGTAATGACGCGAATCCGTTTGTTACCGACCGTTTTGAATTGTTTATCGGTGGGCGTGAACTGGCCAA TGGGTTCTCTGAATTAAACGATGCCGAAGACCAAGCCGAGCGTTTTATGGATCAAGTTCGCGCTAAGGATGCCGGCGATG ATGAAGCCATGCATTACGATGCCGACTTTATCACTGCATTAGAGCACGGTATGCCACCGGCGGCCGGACAGGGCATCGGT ATCGACCGGCTGGTGATGCTGTTCACCGACGCGGCGAGCATCAAGGATGTTTTATTATTTCCGCATATGCGTCCGGCTTA A Protein sequence : MSEQQSTSSNTPELDENKIIAERRAKLDGLRQAGQAYPNTFRRDVLAQDLQSTYGDKTKDELAAMEPVRVKVAGRMMLRR IMGKASFATLQDMSGRIQAYVTRDELPEGFYNEQFKRWDLGDIVGVSGYLFKTNTDELSIHVESIELITKALRPLPDKFH GLQDQEVRYRQRYLDLIMSEQSRRTFETRSKVIHAMREFFVRKGFMEVETPMMQVIPGGASAKPFVTHHNALDMPLYLRI APELYLKRLLVGGFEKVFEINRNFRNEGLSTRHNPEFTMVEFYEAYADYIDMMDYTEEMFKELAQMVLGSGQVPYQGQVF HFDKPFARITMKDSIALYNEGVKVEDLDDIEYCISLAEKLKIDIRPGYGLGKIQTEIFEETVEHRLMDPTFITEYPAEVS PLARRNDANPFVTDRFELFIGGRELANGFSELNDAEDQAERFMDQVRAKDAGDDEAMHYDADFITALEHGMPPAAGQGIG IDRLVMLFTDAASIKDVLLFPHMRPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-144 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-84 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thicy_0827 | YP_004537078.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-144 | 59 |
