|
Name : Thicy_0805 (Thicy_0805) Accession : YP_004537056.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 953109 - 954542 bp Length : 1434 bp Strand : - Note : TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: tcx:Tcr_1360 replicative DNA helicase; SMART: ATPase, AAA+ type, core DNA sequence : ATGACCAAAACACCCGCTAACGAAATCTTTAAAATCCCACCACACTCTGAAGAAGCTGAGCAATCAGTTCTTGGTGCTTT AATGCTCTCCGGTGATATTTTCGATGAGGTTTTTGGTTTAATTAATGAACAAGATTTTTATACTAAACAACATCAGCGTA TTTTTTCAGCGATCCATACCTTAGCTCAGCGAAGTACAGCGGTGGATTTAGTCACGCTTACCAGTCATTTAGAAGCACAG AACCAATTAACTGATTGCGGTGGACGGCATTATTTAATTGATTTAGTAACCAACACACCAGGTCCAAGTAACGCATTATT TTATGCTCGAATTGTTAGAGAGAAGGCGATCCTTCGTCAATTAATAGCGGCTTCAAATGACATTGCTAATCGTTGTTATA ACAGCAAAGGCGCAACCACCCGTGATATCCTTGACCAGGCAGAGTCTAGCGTTTTGGCTATTGCAGAGCATGGTGCCGGA AAACAGCGTCAATATATGACAATTGATGATTTGCTTGGTAGCGCCATGATTCGCTTAGATGAGATTTTTAATACCGAAGG GAATATTACCGGTATCGCCACACATTTATCCGCCTTTGACGATATGACCGCAGGCTTGCAGCGGGGTGATTTATTAATTG TTGCTGGACGCCCCTCAATGGGGAAAACCACCTTCTCGATGAATGTCGCTGAAAATGTCGCTACGCGCTCAAAAGAACCT GTTGCGGTGTTTAGTTTAGAAATGCCAGGAGAACAGTTAGCTCTAAGGATGCTAAGTTCGATTGGTCGCATTGATTCAAA AAAAATGCGGACCGGTGACTTAGGTCCTGAAGATTGGAGTAACCTGAATGCGGCTGTAGCAAAGTTATCATCAGCACAAA TTTTCATTGATGATACGCCGGCACTATCAATCAATGAGTTACGTGCACGAGCAAGGCGTATCGACAAGGATGTGCGTGAA AAACAACGTCGTGAAGCGATTGCAGAAGGGGTAGATTTAGATGCTATTAACGCAAAAGGACTAGGATTAATAGTTATTGA CTACTTACAATTAATGCGCGGCTCAACACAAACTGATAACCGTGTTAACGAAATTTCTGAGATTTCACGCGGTTTAAAAG CATTAGCGAAAGAATTAAATATTCCTGTTATCGCTTTGTCGCAGTTAAATCGTAGCCTTGAACAACGCCCTAACAAACGC CCGGTAATGTCGGATTTACGAGAGTCAGGTGCTATTGAGCAAGATGCCGATTTAATCATCTTTATTTATCGCGATGAGGT TTATAATCCTGATAGTGAAGATAAAGGCACCGCCGAAATTATTATTGGTAAGCATCGTAACGGTTCTATTGGAACGCTAA GACTGACCTTTATTGGTCAATATACTCGCTTTGAAAACTTCATTAACCTTCCTGATCAAGATAATCATTTTTAA Protein sequence : MTKTPANEIFKIPPHSEEAEQSVLGALMLSGDIFDEVFGLINEQDFYTKQHQRIFSAIHTLAQRSTAVDLVTLTSHLEAQ NQLTDCGGRHYLIDLVTNTPGPSNALFYARIVREKAILRQLIAASNDIANRCYNSKGATTRDILDQAESSVLAIAEHGAG KQRQYMTIDDLLGSAMIRLDEIFNTEGNITGIATHLSAFDDMTAGLQRGDLLIVAGRPSMGKTTFSMNVAENVATRSKEP VAVFSLEMPGEQLALRMLSSIGRIDSKKMRTGDLGPEDWSNLNAAVAKLSSAQIFIDDTPALSINELRARARRIDKDVRE KQRREAIAEGVDLDAINAKGLGLIVIDYLQLMRGSTQTDNRVNEISEISRGLKALAKELNIPVIALSQLNRSLEQRPNKR PVMSDLRESGAIEQDADLIIFIYRDEVYNPDSEDKGTAEIIIGKHRNGSIGTLRLTFIGQYTRFENFINLPDQDNHF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-80 | 43 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-85 | 43 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-79 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-80 | 42 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 6e-73 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-79 | 41 |
