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Name : Thicy_0073 (Thicy_0073) Accession : YP_004536328.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 77554 - 78300 bp Length : 747 bp Strand : - Note : PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: tcx:Tcr_2141 3-deoxy-manno-octulosonate cytidylyltransferase DNA sequence : ATGCAAACCTATGTGTTTATTCCCGCGCGCTATGGTAGCTCGCGGCTACCGGGTAAGCCGTTAAAACTCATCGCCGGCAA ACCAATGATTCAGCATGTCTATGAACGGATTGCGAAGGCTGAAGGCTTAGCAGGGGTCTATGTGGCTACTGATGATGAGC GCATTGCAACAGTGGTGCGCAATTTTGGTGGCCAGGTTGTGATGACACCGGTTGAAGCCGCATCTGGCACGGATCGCATT GCCGCGGCCGCCGCGGCTTTGAATTTGGCTGATGATAGTTTGATTGTGAATGTCCAGGGCGACCAGCCCCTGGTACATCA TGAATCCATTGAAGCCGTTATCGCTCCATTCAAGGAGCCTGATTATGACGGCTCTTTTGCAATGAGCACCTTGTCGTTTA AGATTATCAATGAAGCGGAAATTACCAGCCCTAAAGATGTCAAATTGGTGACGGATGTCCATGGTTTTGCGCTGTATTTT TCTCGCGCGACCATTCCACATGGCCGTGATTATTGGGACCATGATTCTTACAAGCATTTGGGTGTTTATGCCTACACCAA AGCGTTTGTCGATGCCTATGCGAGCTGGCCATTAGGCCGCTTAGAGGACATTGAAAAACTAGAACAACTGCGAGTTTTGG AACAGGGCCACAAAATTAAAGTGGTTGAAAGTCGCTATGATTCACCGGAGGTGGATGTCCCTGGTGATTTAGAGATTATG GAAGCCTTGTTATTGTCTGGTCACTAA Protein sequence : MQTYVFIPARYGSSRLPGKPLKLIAGKPMIQHVYERIAKAEGLAGVYVATDDERIATVVRNFGGQVVMTPVEAASGTDRI AAAAAALNLADDSLIVNVQGDQPLVHHESIEAVIAPFKEPDYDGSFAMSTLSFKIINEAEITSPKDVKLVTDVHGFALYF SRATIPHGRDYWDHDSYKHLGVYAYTKAFVDAYASWPLGRLEDIEKLEQLRVLEQGHKIKVVESRYDSPEVDVPGDLEIM EALLLSGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 5e-40 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-39 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-40 | 42 |
