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Name : Thicy_0500 (Thicy_0500) Accession : YP_004536752.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein mutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 626924 - 629512 bp Length : 2589 bp Strand : - Note : SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: tcx:Tcr_1594 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA DNA sequence : ATGACTAACACCGTCTCAGACCATGTCGCCAACCACACGCCTATGATGCAACAGTATCTTAAGATCAAAGCAGAACATTC GGATCGGCTAGTGTTTTATCGCATGGGCGATTTTTACGAATTATTTTATGACGATGCCCTGAAAGCAGCGCGTTTACTCG ACATTACCCTGACCCAGCGCGGTCAATCGGCCGGCAAGCCGATCCCAATGGCCGGGATTCCACATCACAGTGCCGAAGGT TATTTGGCGAAACTTGTGAAATTAGGCGAGTCTATTGCTATTTGTGAACAAGTCGGTGATGTTAGCAACAAAGGCCCTGT TGAACGAAAAGTCGTGCGAATTCTAACCCCTGGTACTCTAACGGAAGACAGCTTGCTTGAAGCGCGCCAAGACAACTTGC TGGTCGCCTGGTCACAACAGGGCAAGCAGATAGGGATTAGCTGGCTAGATGTCGCTAGTGGTCGCTTTGAGGTGACCGCT TTTGATAATCAAGACGATGCCGTAAATGAATTACATCGACTTAATCCCGCCGAATTAATTTTTGCCGAATCGGTCACTCA CCCTGATGAAAGTCTAAGCGCCCATAGCCATAACCTGCCAGATTGGTTATTTCAAGAAGCCGCGGCCAAGCGCTTATTAC TAGAACATTTTAGCACTCGGGATTTAAGCCCATTTGGTTGCGAAAATGCACCCGCCAAAAGCGGTGCCGCTGCGGCTCTA CTCTATTATGCACAATCCATGTTGCAACAACCCTTGCATCAAGTAACCAGCTTGCAAAGTTATCAAACAAACGAGTATTT GACGCTGGATGCTATTACACGCCGCAATCTAGAAATAGATAGTCATCAACAAGGTTTTCAGCATCACACGCTATTTCATT TAATTGACCAATGTCAAACAGCGATGGGCAGCCGATTATTGCGGCGCTGGTTACGCCAACCTTTACGCAATCGAACTCAC ATTCGGCAAAGATTGAATGTGGTTGACAGTTTACTCCACAGCCAAGAGTACCCCATTTTACAAGAACACTTAAAGCCAAT TGGCGATCTAGAACGTATTTTAAGCCGTGTTGCTTTAGGCAGTGCTCGTCCGCGTGACCTGAGCCAACTTAGCCGTGGGC TAAACGCGCTACCAGGCCTGCTAAGCTGGGCAAAAGACTGGGGGGCCTTAGATGCATTAACGGCTCAAATTGACCCTTTT CACGAATTAGGCGACGAACTTAACCGCGCCTTAGTAGCAAACCCGCCTTTATTATTGCGCGATGGGGGTGTTTTTAAATC CGGTTATGATGAACAGCTGGATGAATTATTGGCGCTAAAAACTCAAGCGGGTGATTTTTTAACCGATTTAGAGACTCGCG AACGCGAGCGCACCGGCTTAAACAGCTTAAAAATCGGCTTTAATCGGGTGCAAGGCTATTACATTGAATTAAGTAAACAA TATAGTGATCAAGTACCATTAGATTATACGCGGCGCCAAACTTTAAAAAATGCCGAACGTTACATCACCGCTGAATTAAA AAACTTTGAAACCCAGATTCTCAGTGCCGATGATCGTGCTCAAGCCCGTGAAAATTGGCTCTACGAACAACTCCTTGGCA AGATTCAAGCGCAATTAATGGTCTTACAGCAAACGGCAAATGCGCTAGCAACCCTTGATGTATTAGCCAATTTTGCGGCA CAAGCTATGGCACGCAACTACGCTAAACCCCAGTTTCGTGAGGAACCAGGCCTGGTTATTGAGCAAGGGCGACATCCAAC AGTAGAAGCCCTGTCTCATGAACCCTTTATTGCCAATGATGCTGACTTTAATGAACAACGCCGTTTACACATTATTACCG GTCCCAACATGGGCGGTAAATCGACCTATATGCGCCAAACAGCGATTATTACCATTCTTGCACATATCGGTTGTTTCGTG CCCGCCAAGCAGGCCTGTTTCGGTCCAATTGATCGTATTTTTACCCGCATAGGCGCATCCGATGATTTAACGTCGGGGCG ATCAACCTTCATGGTTGAGATGACAGAAACCGCGCATATATTACGCCATGCTAGTAACCAATCACTGATTCTAATGGATG AGGTAGGCCGCGGCACCTCTACATTTGACGGACTTGCTCTCGCTTGGGCAATTGGCGAATACTTGGCTACTGAGGTTAAA GGTTATTGTTTATTTGCAACCCATTATTTTGAACTGACCAGTCTTGCAGAGCAATTTGACAACACCGTTAATAGTCATTT AACCGCCGTTGAGCACCAAGACAGTATTATTTTTTTACATCAAGTCAAACCGGGTCCAGCATCACAAAGCTATGGCTTAC AAGTTGCCGCCTTGGCCGGGGTTCCCGCGGTGGTGATTACCCAAGCCAAAGCGCGCTTAAACGAACTCGAGCAACCAAGA CCCGCCTTGGTAAACCCATCGAGCCTTGAAAGTGCCGTTAAGGATCATCATCTGCAGTTTGACCTCTTTAATAACCCAGA ACCTGACCCCATAATAACGGCTATACAAAGCCTTGAGCCGGATAACCTAACGCCTAAACAAGCGCTTGAACTGATTTATC AATGGCGTAGTCAGATTAACAAGCCTTAA Protein sequence : MTNTVSDHVANHTPMMQQYLKIKAEHSDRLVFYRMGDFYELFYDDALKAARLLDITLTQRGQSAGKPIPMAGIPHHSAEG YLAKLVKLGESIAICEQVGDVSNKGPVERKVVRILTPGTLTEDSLLEARQDNLLVAWSQQGKQIGISWLDVASGRFEVTA FDNQDDAVNELHRLNPAELIFAESVTHPDESLSAHSHNLPDWLFQEAAAKRLLLEHFSTRDLSPFGCENAPAKSGAAAAL LYYAQSMLQQPLHQVTSLQSYQTNEYLTLDAITRRNLEIDSHQQGFQHHTLFHLIDQCQTAMGSRLLRRWLRQPLRNRTH IRQRLNVVDSLLHSQEYPILQEHLKPIGDLERILSRVALGSARPRDLSQLSRGLNALPGLLSWAKDWGALDALTAQIDPF HELGDELNRALVANPPLLLRDGGVFKSGYDEQLDELLALKTQAGDFLTDLETRERERTGLNSLKIGFNRVQGYYIELSKQ YSDQVPLDYTRRQTLKNAERYITAELKNFETQILSADDRAQARENWLYEQLLGKIQAQLMVLQQTANALATLDVLANFAA QAMARNYAKPQFREEPGLVIEQGRHPTVEALSHEPFIANDADFNEQRRLHIITGPNMGGKSTYMRQTAIITILAHIGCFV PAKQACFGPIDRIFTRIGASDDLTSGRSTFMVEMTETAHILRHASNQSLILMDEVGRGTSTFDGLALAWAIGEYLATEVK GYCLFATHYFELTSLAEQFDNTVNSHLTAVEHQDSIIFLHQVKPGPASQSYGLQVAALAGVPAVVITQAKARLNELEQPR PALVNPSSLESAVKDHHLQFDLFNNPEPDPIITAIQSLEPDNLTPKQALELIYQWRSQINKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-176 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thicy_0500 | YP_004536752.1 | DNA mismatch repair protein mutS | VFG0562 | Protein | 0.0 | 52 |
