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Name : Thicy_0042 (Thicy_0042) Accession : YP_004536297.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 43292 - 45394 bp Length : 2103 bp Strand : - Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: tcx:Tcr_2153 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal DNA sequence : ATGTCCGCCCCACTCAGTGAACTCAAAGTTAGTGGTTTAAAAGGGGTGGGACCCAAGCTGGCCGAGAAACTGGCCAAACT GCATTTGCATAGCCTGCTTGACCTGTTGTTGCATTTACCGCTGCGCTATCAAGACAAAACCCAACTGACCGAACTAAGCC AGTGCTTGCCTGGCACCGAAGCCTTGATTGAGGCTGATATTCTGCAAAGCCGCTTTGTTGGCGGACGCGCTCCCGGTCTT TGGGTGGATTGTTTAAGCCACGACCAAACCCCCATTAGCCTGCGTTTTTTTCATGTCAACGCCAACCAAGCACGCTTCTA TCAACGCGGCAAACGCCTACGCGCCTTTGGCGAATGTCGCCTGGGTATGCAGGGCTGGGAAATGATGCACCCGGATTGCG AGGTATTTAGTGCCGCAGCACCGGCCTTATCCCCGTTTCTGACGCCGATTTATCCCACCACAGAAGGACTGGGGCAAAAG ACGTTACAAAAACTCATTAACCAGGCCTGCGTGCAACTCGAACAGTATCCACTAGACGAACACCTACCCCTAGCCTTGCG TGAACAATGGCAACTGCCGGGGATTAATCAGGCACTGCGCACCTTGCATCAGCCACCTGCCGGCAGTGACATCGGTGCCC TAAGCCGTTTTGAAACACCGGCGCAACAGCGCCTGATTGTTGAAGAGCTGTTTACCCATCAACTGAGTCTGCAGCGCTTG CGTCAAAGCCAACAAGCCACACCGGCACCCGCTTTTAATGCGGCACAGAGCCGGGGCTTAACCCAGTTAATTTATAGCCT GCCTTTTCAGCTAACCCAGGCACAACAGCGAGTTTGGCAAGAAATTAGCCAAGATTTAGCCCAACCCAAACCGATGCAGC GCTTAGTACAAGGTGATGTTGGCTCAGGTAAAACCGTGATTGCGGCCATGGCGGCGCAGATCTGTGCCGAACAAGGCTAT CAAGTCGCGATTATGGCTCCTACCGAAATCCTCGCCGAACAACACCGTCAAGCGATGCAGGACTGGTTAAGTCCGCTCGG ATTACAACTTACTAGCCTGAGTGGTCGACACAAGCCCAGCGAACGCCAACAAATTCTGGCGGCGATTGCATCAGGTGAAT CACAAGTGATTGTCGGCACTCATGCGCTCTTCCAAGACAGTGTGACCTTCAAACAACTCGGCTTAGTGATTATTGATGAG CAACATCGATTTGGGGTGCATCAACGCCTGGCGCTGACCCAAAAAGTGAACGCCGCAAACACAGCGCAAACCTGGCAACC CCATCAACTCACCATGACCGCCACGCCGATTCCACGTACCCTCGCGATGGCCGCTTATGGTGATTTAGATTTATCGGTCA TTGATGAACTGCCACCCGGACGACAAGCGATTGACACCGCGGTGTTAAGCAATGCCAAACGCTATGAGGTGATGGACCAT CTCTACCAGGCCTGCCAAAATGGCGTACAAGCCTACTGGGTTTGCCCGCTAATTGAAGAATCCGAACAACTTAACGCCCA AGCGGCGGCCAGTACCCTCGCTGAATTTCAACAACAATGGTCCGATTTAAAGGTCGGTTTAATCCACGGCAAACTCAAAC CCGCCGAAAAAGAACAACTGATGGCTGATTTTAAGGCCCAAAAACTACAAGTATTAGTAGCCACAACCGTGATTGAAGTT GGGGTGAACGTGCCGAATGCTAGCTTAATGATTATTGAGAACGCGGAACGACTAGGATTAGCACAATTGCATCAGCTACG AGGGCGTGTTGGACGAGGCAGTAAAAAAAGCCACTGTGTTCTGCTTTACCAAGCGCCCTTATCCGAAACTGCTAAAGCAA GGCTAAAAATAATGCGAGAAAGCCAAGACGGCTTTGTCATTGCCGAAGAAGACTTAAAAATTCGTGGTCCCGGTGAGGTG CTTGGTACCCGCCAAACCGGCGGATTGAGTTTTCGGATTGCCGATATTAGTCGTGACCAAGTCTGGTTAACCGAATTGCA ACCCGCCGCCCACGACTGGCTAACCAGCCTACAACAAAGTGGTGATCTAGCCGGGCTCGAGGCACGCTGGCTTGCTCATC GATTGGACTATCATCATGCCTAA Protein sequence : MSAPLSELKVSGLKGVGPKLAEKLAKLHLHSLLDLLLHLPLRYQDKTQLTELSQCLPGTEALIEADILQSRFVGGRAPGL WVDCLSHDQTPISLRFFHVNANQARFYQRGKRLRAFGECRLGMQGWEMMHPDCEVFSAAAPALSPFLTPIYPTTEGLGQK TLQKLINQACVQLEQYPLDEHLPLALREQWQLPGINQALRTLHQPPAGSDIGALSRFETPAQQRLIVEELFTHQLSLQRL RQSQQATPAPAFNAAQSRGLTQLIYSLPFQLTQAQQRVWQEISQDLAQPKPMQRLVQGDVGSGKTVIAAMAAQICAEQGY QVAIMAPTEILAEQHRQAMQDWLSPLGLQLTSLSGRHKPSERQQILAAIASGESQVIVGTHALFQDSVTFKQLGLVIIDE QHRFGVHQRLALTQKVNAANTAQTWQPHQLTMTATPIPRTLAMAAYGDLDLSVIDELPPGRQAIDTAVLSNAKRYEVMDH LYQACQNGVQAYWVCPLIEESEQLNAQAAASTLAEFQQQWSDLKVGLIHGKLKPAEKEQLMADFKAQKLQVLVATTVIEV GVNVPNASLMIIENAERLGLAQLHQLRGRVGRGSKKSHCVLLYQAPLSETAKARLKIMRESQDGFVIAEEDLKIRGPGEV LGTRQTGGLSFRIADISRDQVWLTELQPAAHDWLTSLQQSGDLAGLEARWLAHRLDYHHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 6e-105 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thicy_0042 | YP_004536297.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 5e-141 | 53 |
