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Name : Thicy_0376 (Thicy_0376) Accession : YP_004536630.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 516808 - 519369 bp Length : 2562 bp Strand : + Note : TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: tcx:Tcr_0414 AAA ATPase; SMART: ATPase, AAA+ type, core DNA sequence : ATGGATAAATTTACTAGCCAGTTTCAATCGGCTCTAGCGCAAGCGCAATCTCTGGCCAATAGCCAAGATAATCAATTTAT TGAACCTGTACATATTTTATCCAGTTTATTGCCTGACCAGGGTCATTTATTGCGCCTAGCCGGTGTCGATGTCAATGGGC TGAATCAAGCCGTGCAGGCCAAACTGAAAACCCTGCCGCAAGTGAGTGGGGCAGGCGGCGATGTGCAAATCTCGCGTCAA ACCGGCGCGATTTTGAATTTAATGGAAAAACAGGCGCAGAAAAATGGCGATGCCTATATTTCGAGCGAGCTGTTTTTCCA AGCCGCTCTGGAATCCAAAGATCAGGTGGCCGATTTATTAAAGCAAGCGGGGACGACTGAGAGCAGACTCGCTCAGGCGA TTCAACAAGTACGAGGAGGGGAAAGCGTGCAAGACCAAAATGCTGAGTCCACGCGTCAAGCGTTGAAAAAATACACCATA GATTTAACCTCGCGCGCCGAGTCGGGCAAACTCGATCCGGTGATTGGTCGAGACGACGAAATCCGCCGTGCGATACAGGT TTTGCAACGCCGCACCAAAAACAATCCGGTATTAATCGGTGAGCCGGGTGTCGGTAAAACCGCGATTGTGGAAGGCTTAG CGCAGCGTATTATCAATGGCGAAGTGCCGGAAGGTTTGCGTAACAAGCGGGTGTTGTCGCTGGACTTGGGCGCGTTGTTG GCCGGTGCGAAATATCGCGGCGAGTTTGAAGAACGCCTCAAAGCGGTGCTAAAAGACCTGTCGAAAAACGAAGGCCAGGT GATTTTGTTTATTGATGAAATTCATACCATGGTCGGCGCGGGTAAAGCCGAAGGCGCAATGGACGCAGGTAATATGCTGA AACCGACCCTGGCGCGCGGTGAGTTGCATTGCATCGGCGCGACCACGCTGAATGAATACCGTGACAATATCGAAAAAGAC GCCGCGTTGGAGCGCCGTTTCCAAAAAGTATTGGTCGATGAACCGACTGAAGAAGATACGATTGCGATTTTGCGCGGCTT AAAAGAACGTTACGAAGTGCATCACGGCGTGGCGATTACCGATCCGGCAATTGTGGCGGCGGCGCGTTTGTCGCAACGTT ATATCACTGACCGCCAACTGCCGGATAAAGCAATTGATTTGATCGATGAAGCCGCCTCGCGTATTCGGATGGAGATTGAC TCTAAACCGGAAGAAATGGACAAGCTTGATCGCCGTTTAATCCAGCTCAAAATGGAGCAGGTGGCGCTGAAAAAAGAGAA AGACGATGCCTCGAAAAAAAGACTGGAAATCTTAAAAGACCAAATCAAAGAACTAGAAAAACAATATTCCGATTTTGAAG AAGTCTGGAAAAAAGACAAGGCCGCTTTGCAGGGCGCACAGCAATACAAAGAAGCGCTCGACAAAGCACGTACCGAAATG GAAGCCGCACGCCGTGAAGGCAATTTAGCCAGGATGTCAGAGTTGCAATATGGCGTGATTCCCGATTTAGAAGCCAAAAT CAAAGCGGCTGAAGCGTCGGAAGCGGAAGGCGACGACCACATGCATCTGTTGCGTAATAAAGTCACCGAAGATGAAATTG CTGAAGTCGTGTCGCGCTGGACTGGTATCCCGGTGTCGCGCATGATGGAAGGCGAGCGCGAAAAACTTCTGCGTATGGAA GAAAGCCTCAGCGCCAAAGTGGTTGGTCAAGACGAAGCGGTGAAAGCGGTGTCGGATGCGATTCGTCGTTCGCGCGCCGG ATTATCCGACCCGAACAAACCGAATGGTTCGTTCCTATTCCTTGGCCCAACAGGGGTGGGGAAAACCGAGCTGACCAAAT CCTTGGCGGATTTCTTGTTCGATAGCCAAGATGCGATTGTGCGGTTGGATATGTCGGAGTTTATGGAAAAACACTCGGTC GCACGTTTAATCGGTGCGCCGCCCGGTTATGTCGGTTACGAGCAAGGTGGTTATCTAACCGAAGCCGTGCGCCGCAAGCC TTACTCGGTGATTCTGCTGGATGAGGTTGAAAAAGCGCACCCAGATGTGTTTAATATTCTGCTGCAAGTGCTGGACGACG GGCGTTTAACCGACGGTCAAGGTCGCACGATAGATTTCCGTAACACGGTCATTGTGATGACCTCCAACCTCGGTTCGCAG ATTATTCAAGAACTGGCGGGCGAAGCGAATTACGATGCCATGAAGTCTGCGGTAATGGATGTGGTCGGTGGCCATTTTCG CCCTGAGTTTGTCAACCGTATTGACGACATTGTGGTGTTCCATCCGCTTGGTAAAGCGCAAATTCGTGCGATTACCGATA TTCAGCTACAGCGTCTGCGTGATCGTTTGGTGGATTTGGATATTAAACTCGATGTGTCGATTCCGGCGCTGGATGTGATG GGCGAAGCCGGGTTCGATCCAGTGTATGGCGCGCGTCCGCTTAAACGGGTGATTCAGCAACGCTTAGAAAACCCGCTAGC GCAACGCATCCTAAAAGGCGAGTTCCTTGCGGGTTCAACTATTCACGTTGAACTGGAAGACGGCGAGCTTAACTTCCACT AA Protein sequence : MDKFTSQFQSALAQAQSLANSQDNQFIEPVHILSSLLPDQGHLLRLAGVDVNGLNQAVQAKLKTLPQVSGAGGDVQISRQ TGAILNLMEKQAQKNGDAYISSELFFQAALESKDQVADLLKQAGTTESRLAQAIQQVRGGESVQDQNAESTRQALKKYTI DLTSRAESGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRNKRVLSLDLGALL AGAKYRGEFEERLKAVLKDLSKNEGQVILFIDEIHTMVGAGKAEGAMDAGNMLKPTLARGELHCIGATTLNEYRDNIEKD AALERRFQKVLVDEPTEEDTIAILRGLKERYEVHHGVAITDPAIVAAARLSQRYITDRQLPDKAIDLIDEAASRIRMEID SKPEEMDKLDRRLIQLKMEQVALKKEKDDASKKRLEILKDQIKELEKQYSDFEEVWKKDKAALQGAQQYKEALDKARTEM EAARREGNLARMSELQYGVIPDLEAKIKAAEASEAEGDDHMHLLRNKVTEDEIAEVVSRWTGIPVSRMMEGEREKLLRME ESLSAKVVGQDEAVKAVSDAIRRSRAGLSDPNKPNGSFLFLGPTGVGKTELTKSLADFLFDSQDAIVRLDMSEFMEKHSV ARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTIDFRNTVIVMTSNLGSQ IIQELAGEANYDAMKSAVMDVVGGHFRPEFVNRIDDIVVFHPLGKAQIRAITDIQLQRLRDRLVDLDIKLDVSIPALDVM GEAGFDPVYGARPLKRVIQQRLENPLAQRILKGEFLAGSTIHVELEDGELNFH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-161 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-104 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thicy_0376 | YP_004536630.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 7e-116 | 42 |
