Gene Information

Name : Thicy_0367 (Thicy_0367)
Accession : YP_004536621.1
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Unknown
Product : ATP-dependent hsl protease ATP-binding subunit hslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 507438 - 508757 bp
Length : 1320 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: tcx:Tcr_0404 ATP-dependent protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA

DNA sequence :
ATGATGACGCCAAAAGAAATTGTTCACGAACTCGACAAACATATCATTGGGCAAGATGACGCCAAAAAAGCTGTCGCCGT
TGCCTTACGCAATCGCTGGCGCCGGATGCAACTTCCTAAGGAATTAGGGGCCGAAGTCACCCCTAAAAACATTTTGATGA
TTGGTCCAACCGGTGTTGGTAAAACTGAAATCGCGCGCCGCTTAGCGAAACTGGCTAATGCCCCGTTTATCAAAGTTGAA
GCGACGAAATTTACCGAAGTCGGTTATGTTGGCCGTGATGTTGACTCGATCATTCGCGATCTAGTTGATAATGCGGTCAA
AATGCAACGGGAACAAGCCGTGCAAAAAGTTAAAACGCGCGCAGAAGATGCCGCTGAAGAACGTATTTTGGATATTCTGC
TACCACCGGCTCGTGGGCGCGAAGAGGATAGCCATGAAGCCATGGCGGAAACTCGCCAAAAATTCCGCAAAAAACTGCGT
GAAGGTCAATTAGACGACAAAGAGATCGAAATTGACCTAAAAGTGAATCCAGCACATGTTGAAATCATGACGCCACCGGG
CATGGAAGACATGACCTCTCAGCTGCAAGATATGTTTCAATCCCTTGGCAGCAACAAAAAGCAAAAGCGAAAATTGCCGA
TCAAAAAAGCCTTCAAGTTACTCATTGAAGAAGAAGCCCAGCGCCTAGTCAATGACGAAGACATAAAATCGCAAGCTGTT
GAAAACGTAGAACAAAACGGCATCGTGTTTATTGATGAAATAGACAAAGTTACCAAGCGTAATGGCGCATCGGGCGGTGA
TGTATCGCGAGAAGGGGTACAGCGTGACCTACTGCCACTGATTGAAGGCAGCACCATCTCCACCAAATATGGCATGATTA
AAACCGACCATATTTTATTTATTGCCTCGGGCGCGTTCCACATGAGCAAACCGGCCGATTTAATTGCCGAATTACAAGGC
CGCCTACCCATTCGGGTTGAACTAAAATCGCTGCGGGTGAAAGATTTTGTGCGTATTCTGACCGAACCGAAAGCGGCACT
GACCACGCAGGCAACAGCGTTATTAGGCACCGAAGGTTTTTATGTGAGCTTTACCCCGGATGGTATCCAGCGCTTGGCTG
AAATTGCCTATCAAGTGAATGAAAGCACCGAAAACATTGGCGCACGACGCTTACACACTGTTATGGAACGTTTGCTTGAA
GAAGCGTCTTATAATGCACCCAATCAAGCGGGACAAACCCTCGAGGTTAATGCAACATTTGTAGACGAACGTCTGGGCGC
GCTAGCGAAAGATCAGGATTTATCGCAGTATATTTTATAA

Protein sequence :
MMTPKEIVHELDKHIIGQDDAKKAVAVALRNRWRRMQLPKELGAEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE
ATKFTEVGYVGRDVDSIIRDLVDNAVKMQREQAVQKVKTRAEDAAEERILDILLPPARGREEDSHEAMAETRQKFRKKLR
EGQLDDKEIEIDLKVNPAHVEIMTPPGMEDMTSQLQDMFQSLGSNKKQKRKLPIKKAFKLLIEEEAQRLVNDEDIKSQAV
ENVEQNGIVFIDEIDKVTKRNGASGGDVSREGVQRDLLPLIEGSTISTKYGMIKTDHILFIASGAFHMSKPADLIAELQG
RLPIRVELKSLRVKDFVRILTEPKAALTTQATALLGTEGFYVSFTPDGIQRLAEIAYQVNESTENIGARRLHTVMERLLE
EASYNAPNQAGQTLEVNATFVDERLGALAKDQDLSQYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 7e-96 47