Gene Information

Name : Thicy_1631 (Thicy_1631)
Accession : YP_004537867.1
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1869923 - 1870858 bp
Length : 936 bp
Strand : -
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: tcx:Tcr_0112 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence : 
ATGAAAAATCATTTGCGTATTGCGACCCGAAAGAGTCCCCTTGCTCTCTGGCAAGCTGAGTTTGTTAAAGCCGAGCTAGA
AAAAGCCCATGCCGGTTTAAAAGTGACGTTAGTGCCAATGAGTACGCGCGGTGATAAGATTTTGGATGTGCCGTTGGCCA
AAGTGGGTGGTAAGGGTTTATTTACCAAGGAATTAGAAGAACAAATGCTCGCTGGTCAGGCCGATTTAGCGGTGCATTCA
ATGAAAGACGTGCCGATGGTATTACCGGAAGGTTTTGCACTGAGTGCGATTATGGCACGCCATGATCCATCCGATGCGTT
TGTATCTAATAACTACGCGAACCTAGACGAGTTGCCGCAGGGTGCGATTTTAGGGACTTCTAGTTTACGCCGTCAGGCAC
AGTTCCAAGCCTTGCGCCCAGATCTTGAGATTCGTTTTTTGCGCGGTAACGTCGGTACCCGCTTAGGCAAATTGGATGCG
GGTGAGTATGACGCGATTGTGTTAGCAACGTCCGGCTTAGAGCGCTTGGGATTAGATGAGCGGATTCGCTGTAAAATGCA
ACCTGAACAAATCTTGCCGGCGGTGGCGCAAGGGGCATTGGGCATTGAAACCCTAGCTAATGACACAGAAACCCAAGCAT
TAATTGCTGTGCTTAATGACCCTTTAACCGCAACGGTGGTCAAAGCCGAACGTGCGATGAACCGTTGCTTAGATGGTGGC
TGTCAAGTGCCGATAGGGGGATTTGCGCTGTTAGAAAATGACCAGGTCTGGTTGCGCGGTTTGGTGGCCGAACCGGATGG
CTCCAAAATGATTAAGATGGAAGGACGTGCGCCCGCTTCGCAAGCGGAAGGTTTAGGTCGATTAATTGGCCAAGCTTTAT
TAGATGCCGGTGCTAAAGAGATTCTAGCCAAGTTGTATCAACCCGAATCAGCCTAA

Protein sequence : 
MKNHLRIATRKSPLALWQAEFVKAELEKAHAGLKVTLVPMSTRGDKILDVPLAKVGGKGLFTKELEEQMLAGQADLAVHS
MKDVPMVLPEGFALSAIMARHDPSDAFVSNNYANLDELPQGAILGTSSLRRQAQFQALRPDLEIRFLRGNVGTRLGKLDA
GEYDAIVLATSGLERLGLDERIRCKMQPEQILPAVAQGALGIETLANDTETQALIAVLNDPLTATVVKAERAMNRCLDGG
CQVPIGGFALLENDQVWLRGLVAEPDGSKMIKMEGRAPASQAEGLGRLIGQALLDAGAKEILAKLYQPESA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-76 57
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-76 57