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Name : Thicy_1450 (Thicy_1450) Accession : YP_004537689.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 1672789 - 1675038 bp Length : 2250 bp Strand : + Note : KEGG: alv:Alvin_2061 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal DNA sequence : ATGAAATTTCGCTTCCCCGTCGTCATTATTGATGAAGACTTTCGCTCTGAAAATGCGTCCGGCACCGGTGTTCGTGCTTT AGCCGATGCGATTGAATCGGCGGGAATGGAAACCCTTGGTGTAACAAGCTTTAACGACACCGCCATGATTGCCCAGCAAC AAAACCGAGCCTCCTGCTTTATCCTGTCCATTGACGATGATGAGTTTGCCGACGAAGAACTCAAAGACAGTGCGATTGCC AAGCTACGACTGTTTGTTGAAGAAATCCGCAACCGTAACTCGGATATCCCGATTTTTTTATACGGTGAAACCCGCACCTC GCGCCATATTCCAAACGACGTGCTAAAAGAGTTACACGGCTTTATTCATATGTTTGAAGATACGCCCGAATTTGTGGCGC GGCATATTATGCGTGAAGCGCGCGTCTATTTAGACGGCTTGGCGCCACCCTTTTTCCGTGCACTAACCGGCTATGCGGCT GATGGTTCTTACTCTTGGCACTGCCCAGGCCATTCCGGTGGTGTCGCATTTCTAAAAAGCCCAGTGGGACAAATGTTCCA TCAGTTTTTTGGTGAGAATATGTTGCGTGCCGATGTCTGTAACGCAGTGGATGAGCTGGGTCAATTACTCGACCATACCG GCGCGGTGGCCGATTCCGAACACAATGCGGCACGCATCTTCGGGGCCGATCACTTGTTTTTTGTCACCAATGGCACCTCG ACTTCCAACAAAATTGTTTGGCACGCCAATGTCGCCGATAATGACGTGGTGGTAGTGGACCGTAACTGCCATAAATCCGT TCTCCACTCAATTATTATGACTGGCGCCGTGCCGGTGTTTTTGATGCCGACCCGCAACCACTACGGCATTATCGGCCCTA TTCCGGAAAGCGAATTCCACCCGGATACCATTAAGCAGAAAATTGCCGCAAACCCATTGGTGAAAAACCCCAATGCCAAA CCGCAAATGCTCACCATCACCCAAAGTACTTATGATGGTATTTTGTATAACGTCGATAAAATTAAAAAAACTCTCGGTGA GTCGGTTGAGAACCTCCACTTCGATGAAGCCTGGTTACCGCACGCGACCTTCCATGAATTCTACAAAGGGATGCACGCCA TTGGACGCGATACCAATCGCTCCGAAGGCCCTATGGTGTATGCCTGTCAATCCACCCATAAACTACTTGCCGGCTTAAGC CAAGCCAGCCAAATTTTGGTGCAAGAATCACCCAAGCGTATGCTAGACCGCGGCCGCTTTAACGAAGCCTACTTAATGCA CGTTTCCACCAGCCCGCAATATGCGATTATTGCTAGTTGTGACGTCGCCGCGGCCATGATGGAGCCCCCGGGTGGTACGG CACTGGTTGAGGAATCGATTGCTGAAGCGATTGACTTTAGACGCGCAATGCGCAAAGTCGATGAAGAATACGGTGACTCT TGGTGGTTTAAGGTTTGGGGTCCCGATGAGTTAGCCGAAGAAGGGATTGGCGAACGTGATGATTGGGTATTGCGCACCGA TGATCCCTGGCATGGCTTTGGTAATTTAGCGTCTAACTTTAATATGCTCGATCCGATTAAAGCGACCATCATTACACCCG GCCTGGCGGTCAATGGCGATTTTTCAGAGTCTGGTATTCCAGCAGCCATCGTGACGCGCTACCTCGCCGAACACGGAGTT ATTATTGAAAAAACAGGGCTCTACTCCTTCTTTATCATGTTTACCATTGGGATTACCAAAGGCCGTTGGAATACGATGGT AACCGCCTTACAGCAGTTTAAAGACGACTATGATCGCAATATGCCGTTATGGCGCGTGTTACCTGGGTTCATTAAAAAAT ACCCTCGTTATGAGCGTATTGGTCTGCGTGATTTGTGTAATGCCATTCACAACATGTATCGTGAAAGTGATGTCGCGCGC TTAACCACCGAGATGTATACCTCGCACATGGAGCCAGCGATGAAACCCGCTGATGCCTACGCGATGATGGTGCATAACAA AATCGAGCGTGTTGAAGTTGACGATCTAGAAGGCCGCATTACCGCGGTACTATTGACACCTTATCCACCGGGTATTCCAT TACTGATCCCTGGCGAACGCGTCAATAAAACGATTTTGAACTACTTAAAGTTTGCGCAAACGTTTAACGAGAAATTCCCT GGCTTTGAAACGGATGTTCATGGTCTGGAAAAAATCGAAAAAGATGGCAAAACGGTTTATGCGATGGACTGCGTTAAACG AGACGTTTAG Protein sequence : MKFRFPVVIIDEDFRSENASGTGVRALADAIESAGMETLGVTSFNDTAMIAQQQNRASCFILSIDDDEFADEELKDSAIA KLRLFVEEIRNRNSDIPIFLYGETRTSRHIPNDVLKELHGFIHMFEDTPEFVARHIMREARVYLDGLAPPFFRALTGYAA DGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGAVADSEHNAARIFGADHLFFVTNGTS TSNKIVWHANVADNDVVVVDRNCHKSVLHSIIMTGAVPVFLMPTRNHYGIIGPIPESEFHPDTIKQKIAANPLVKNPNAK PQMLTITQSTYDGILYNVDKIKKTLGESVENLHFDEAWLPHATFHEFYKGMHAIGRDTNRSEGPMVYACQSTHKLLAGLS QASQILVQESPKRMLDRGRFNEAYLMHVSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRRAMRKVDEEYGDS WWFKVWGPDELAEEGIGERDDWVLRTDDPWHGFGNLASNFNMLDPIKATIITPGLAVNGDFSESGIPAAIVTRYLAEHGV IIEKTGLYSFFIMFTIGITKGRWNTMVTALQQFKDDYDRNMPLWRVLPGFIKKYPRYERIGLRDLCNAIHNMYRESDVAR LTTEMYTSHMEPAMKPADAYAMMVHNKIERVEVDDLEGRITAVLLTPYPPGIPLLIPGERVNKTILNYLKFAQTFNEKFP GFETDVHGLEKIEKDGKTVYAMDCVKRDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 3e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thicy_1450 | YP_004537689.1 | lysine decarboxylase | VFG1670 | Protein | 1e-104 | 41 |
