Gene Information

Name : Thicy_1418 (Thicy_1418)
Accession : YP_004537659.1
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1605595 - 1606602 bp
Length : 1008 bp
Strand : -
Note : PFAM: Glycosyl transferase, family 2; KEGG: sua:Saut_1555 glycosyl transferase 2

DNA sequence :
ATGATTTCATTTGTCGGTGAAGATATTGCTAAATCAGTGGGTCGGGGGATTAATTTATCCAGTTTGGACAAGGATTTTGC
TCAACGTGTAGATTTGTCGATAGTCGTCCCTTGTTTTAATGAAGAGGCCGTTATTCCGGTTTTTTTAACAACACTTATCC
CTATTTTACAGTCGCTTGAACTGACTTATGAGTTAGTTTTTATCAATGATGGCAGCCGAGATAAAACACTGGATGTCCTA
TTAGAGCAAAAACAAACCTACCCTGAAATTCGAATCATTAATTTTTCACGTAATTTTGGCAAAGAAGCGGCGCTATCGGC
GGGTATTGATTTTGCACAAGGTAAAGCTTTAATTCCAATTGATGTTGATTTACAGGATCCACCAGAGTTAATCCGAGAAA
TGGTGCGCATTTGGCAGGAAAAAAATGTTGATGTAGTCCTAGCCAAACGAGTTGATCGTAGTAAAGACAGTTTCTTTAAG
CGTTGGAGTGCCAATGTTTTTTATCGGCTGAATAATTTGATTTCTGATAACCGTATTCCTGAAAATGTAGGCGACTTCCG
TTTAGTGTCGCGTCGTTGCGTCGAAGCGATTAAAATGATGGGCGAAACTCAGCGTTTTATGAAGGGGGTTTTTGCTTGGG
TCGGTTTTAAAACCCAGGTGATAGAGTATCAGCGTGATGAGCGTCAAGCGGGTAAAACCAGCTTTAACGCATGGAAGCTT
TGGAATTTAGCGCTTGAAGGAATTACCAGCTTTTCGACCGCGCCTTTAAGAGTGTGGCTTTATTTAGGGCTTGTTGCTTG
GCTCTTATCGATTACTTACGGTTTCTGGATTATTTTACGAACTTTGATTTTTGGGGTCGATATTCCCGGTTATGCCTCCA
TGTTTACCGCCATTTTGTTTTTAGGAAGCACGCAGCTTATCGTGCTGGGTGTGCTAGGTGAATACATTGGCCGAATCTAT
TTAGAAAGCAAAGGTCGTCCGCTTTATATTGTCGAAAAAGAATATTAA

Protein sequence :
MISFVGEDIAKSVGRGINLSSLDKDFAQRVDLSIVVPCFNEEAVIPVFLTTLIPILQSLELTYELVFINDGSRDKTLDVL
LEQKQTYPEIRIINFSRNFGKEAALSAGIDFAQGKALIPIDVDLQDPPELIREMVRIWQEKNVDVVLAKRVDRSKDSFFK
RWSANVFYRLNNLISDNRIPENVGDFRLVSRRCVEAIKMMGETQRFMKGVFAWVGFKTQVIEYQRDERQAGKTSFNAWKL
WNLALEGITSFSTAPLRVWLYLGLVAWLLSITYGFWIILRTLIFGVDIPGYASMFTAILFLGSTQLIVLGVLGEYIGRIY
LESKGRPLYIVEKEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 3e-72 56
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 7e-74 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thicy_1418 YP_004537659.1 family 2 glycosyl transferase VFG0670 Protein 4e-72 56