|
Name : Thicy_1400 (Thicy_1400) Accession : YP_004537641.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Unknown Product : tyrosine recombinase xerC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1585337 - 1586239 bp Length : 903 bp Strand : - Note : KEGG: tcx:Tcr_0651 tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage DNA sequence : ATGCCATTTGATCAAGCCTTAGCCGCATTTATGCGCTATTTACATTTAGCCCAAGGCTTAAGCCGTGCCACTCAGCAGGC ATATCAGCGGGATTTGCGCGATTTTGTTCTGCGGGTGGGTGGTGAGCCGGCGTTAAGCTCGACCGCATGGCTCAACTGGC AAGAAGCAGATATTCGCCAGTATCTGACGGGTTTATCGGTGGAAGCGAAACCGCAAACGCTCGCTCGGCGTTTGGCGGCC ATTAAGCGTTTGTATAAGTTTGCGTTGCACCAGGCCTGGTTGTCGGTCCATCCCGCGCAACAACTGCAGGCGCCGAAACG CCAACAATCGATTCCTACGGTGTTGTCTGAGCAGAGCATAACCGCACTCCTGGCGGCACCCGATGTAAATTCGTCTTTAG GTTTGCGAGATAGAGCGATTTTAGAGCTGATGTATGCTACGGGATTGCGTGTTTCGGAAGTGGTCAGCCTGCCTTTGGCG CAGGTTGATTTAACAGCAGGCCTGCTAATGGTGGTGGGTAAGGGTAATAAACAGCGGATTATTCCGCTGGGGGAGTGGGC GCAAGATTGGCTGGCCCAGTATTTAGCGCGCGCACGACCAGGCCTGCTGAAACCAGGTGCGACGCTTGATGAGGTGTTTA TCTCACGAGTCGGTCGGCCAATGACGCGACAAACATTGTGGCATCGTATCCATAATCTTGCGCAACAGGCGGGTCTCACT GGTACACTATCTCCCCATGGTTTACGTCATGCGTTTGCTACGCATTTAATTAACCATGGTGCCGATTTACGCAGTGTGCA GTTATTGCTTGGACATAGCGATTTATCGACCACGCAAATTTATACGCATGTGGCGAAGGCACGTTTAAAACAGCTTCATC AACAACATCATCCGCGCGGTTAG Protein sequence : MPFDQALAAFMRYLHLAQGLSRATQQAYQRDLRDFVLRVGGEPALSSTAWLNWQEADIRQYLTGLSVEAKPQTLARRLAA IKRLYKFALHQAWLSVHPAQQLQAPKRQQSIPTVLSEQSITALLAAPDVNSSLGLRDRAILELMYATGLRVSEVVSLPLA QVDLTAGLLMVVGKGNKQRIIPLGEWAQDWLAQYLARARPGLLKPGATLDEVFISRVGRPMTRQTLWHRIHNLAQQAGLT GTLSPHGLRHAFATHLINHGADLRSVQLLLGHSDLSTTQIYTHVAKARLKQLHQQHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 9e-61 | 47 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 9e-61 | 47 |
