Gene Information

Name : Thicy_1067 (Thicy_1067)
Accession : YP_004537313.1
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : 3.6.3.28
Position : 1212988 - 1213680 bp
Length : 693 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: tcx:Tcr_0550 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACCCACAATCCGACTAACCCTATTTTGCGCTTGCACAATGTTCACTACGAAGTATCCTCTGCTGCTTCATCTTTGGC
TATCTTAAAGGGCTGTGAACTAGAAGTCGAGCCACAACAGAGTCTGGCGATTGTTGGGCGTTCCGGTTCTGGCAAATCGA
CTTTGCTGGCGCTGATGGCGGGCTTAGATACTGCCACACGGGGTGATGTGCAATTGCTCTCGCACAATTTATCACAACTC
AATGAAGATCAACGTGCCCAAGTTCGCGCACAATCGGTCGGATTTGTGTTTCAAAACTTTCAACTGATGTCGGGCTTAAC
CGCGTTAGAAAATGTCATGATGCCCTTGGAATTGTTTAATCTTGATCAACCCAAACAACGCGCTGAAGCGGCCTTAGAAT
CCGTTGGCCTATCGCACCGCTTGCATCATCGCCCACAATCTTTATCGGGTGGCGAACAACAACGCGTCGCCATCGCCCGC
GCCCTCGTCACTCAGCCCAAAATTTTGTTTGCCGATGAACCGACCGGCAACCTAGACGAAACCACCGCCAATCAAGTGCA
AGATCTGTTGTTTCAACTACAAGACCATACCACCTTAATCTTGGTTACCCATGATGTCGACTATGCTGCGCGCTGTCAGC
GGCAAGTACGTTTAGAGCATGGTCAACTCATTGAGGACACAGTATGCCGTTAA

Protein sequence : 
MTHNPTNPILRLHNVHYEVSSAASSLAILKGCELEVEPQQSLAIVGRSGSGKSTLLALMAGLDTATRGDVQLLSHNLSQL
NEDQRAQVRAQSVGFVFQNFQLMSGLTALENVMMPLELFNLDQPKQRAEAALESVGLSHRLHHRPQSLSGGEQQRVAIAR
ALVTQPKILFADEPTGNLDETTANQVQDLLFQLQDHTTLILVTHDVDYAARCQRQVRLEHGQLIEDTVCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thicy_1067 YP_004537313.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 3e-37 47
Thicy_1067 YP_004537313.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 2e-33 46