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Name : Thicy_1040 (Thicy_1040) Accession : YP_004537286.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 1186150 - 1187310 bp Length : 1161 bp Strand : - Note : PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; manually curated; KEGG: hel:HELO_3591 riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-ter DNA sequence : ATGCTAAGCTCATATCCTCATTCGCTCACGGATTCAATTTGGATGAATCGTGCGCTGGATCTTGCAAGTCTTGGTCGCTT ATCAACCCGTCCTAATCCAGCTGTCGGTTGTGTTTTAATCAAAGAAGGCCAGCTGATTGGAGAGGGCTGGCATCAGCGTG CCGGTGAGCCTCATGCTGAAGTGTTAGCTCTTCGCATGGCCGGTGATAGAGCACGTGGTGCCACAGCCTATGTAACCCTA GAGCCCTGCTCGCATTTTGGAAAAACACCGCCTTGTTGCAATGCACTCATTACAGCCGGTATTAAACGGGTGGTAATTGC TATGATCGATCCCAATCCACGGGTTTCTGGGCGCGGTATTGCAGCACTTCAGGAGTCAGGCATTGAGGTCACCCAAGGCG TGGCAATGAAACGAGCACAACAACTTAACAAAGGCTTTGTCAGCCGGATGCAACGAGGGCGGCCTAATGTTAGTTTAAAG TTAGCCACGAGTGTTGATGCGAAGGTGGCCTTAGCTAACGGTCAAAGCCAATGGATTACCAATGCACTAGCAAGGGCGCA AGGTCATCTATTACGCGCGCAGCAATGTGCCATTATCACCGGGATTGCTAGTGTTATCACTGATGATCCTCGATTAACGG TGCGACTTGATGATTCGGCGTTTTATGCTCAGGGCTGGTCAAGTGCCGGTCGTGTTGAACCGATGAAGGTCGTGGTAGAT AGTCGGTTGCGTATACCTTTGAATGCGAAGCTCTGTCAGCAAGCGGACGCTTTGATAATTTATACAACCAGGGCAACGTT ATGCGCCCAAGCCGATAAGGTTGCGCAGCTTGCGGCAAAGGGTATTAAAGTTCATGGGGTTGATTGTGACCCGCAACATA GAGTTAACTTGGTGTCGGTGCTAGCGCATTTAGCATCACACTATCAGTGTAATAATGTCATGCTTGAGTCCGGAGGGGTT TTAGCTGGTGCGATGCTTTCCATTGATTGTGTTGACGAGATTCATTGGTTTAGTGCACCTTTGGTGTTGGGGCAGGACGC ACAGAGTTGTTTCGTTACCCAAACCTTAACGCAACTGTCTCAAGCCCCACGTTTAAAACTGGTCGAACAGACAATGTTGG GCGATAATATATACTCGCGTTATCAATTGGAAAAGGAATAG Protein sequence : MLSSYPHSLTDSIWMNRALDLASLGRLSTRPNPAVGCVLIKEGQLIGEGWHQRAGEPHAEVLALRMAGDRARGATAYVTL EPCSHFGKTPPCCNALITAGIKRVVIAMIDPNPRVSGRGIAALQESGIEVTQGVAMKRAQQLNKGFVSRMQRGRPNVSLK LATSVDAKVALANGQSQWITNALARAQGHLLRAQQCAIITGIASVITDDPRLTVRLDDSAFYAQGWSSAGRVEPMKVVVD SRLRIPLNAKLCQQADALIIYTTRATLCAQADKVAQLAAKGIKVHGVDCDPQHRVNLVSVLAHLASHYQCNNVMLESGGV LAGAMLSIDCVDEIHWFSAPLVLGQDAQSCFVTQTLTQLSQAPRLKLVEQTMLGDNIYSRYQLEKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-58 | 42 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-58 | 42 |
