Gene Information

Name : Thicy_1039 (Thicy_1039)
Accession : YP_004537285.1
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 1185501 - 1186148 bp
Length : 648 bp
Strand : -
Note : TIGRFAM: Lumazine-binding protein; KEGG: tcx:Tcr_1399 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein

DNA sequence :
ATGTTTACAGGGATTATTGCGGCAGTTGGGCATATCAAGGCGATTGAACCGAAAAATGGCGATTGGCGATTAACTCTGGC
AACGGGTTCATTGGCTCTGTCGGATGTTCAGTTGGGCGATAGTATTGCAACCAATGGTGTTTGTTTAACCGCCATTGAGT
TAGGCGCTGATTTTTTTGTCGCGGATGTTTCGGCTGAAACCCTTGGGGTAACAACGCTGGGTTCCATGAAGGTTGGTTCT
CGTGTTAATTTAGAAAAAGCCCTGCGTTTAGCCGATCGTTTAGGTGGTCATCTGGTTAGTGGACATGTTGATGGGGTCGG
AGAGGTGCTTCGCGTGTCACAAGACGCTCGATCATGGCGTTTTGTCATCTCGGCCCCCAACACTATTGCGCACTATATTG
CGCACAAAGGATCGGTTTGTATTAATGGTATTAGCTTGACAGTTAACCATGTTGATGGGCATACCTTTGACGTCAATATT
GTGCCACATACTATGGACAATACCACTATCGTTGATTGGCAGGTTGGAACACAGCTTAACCTAGAGGTTGACTTGTTAGC
GCGTTACCTTGAGCGGTTACTTCAAGGGCAGCAAGCTCCAGCGCCATCAAAGATTACGGCTGATTTTTTAGCTAGCAGCG
GATATTAA

Protein sequence :
MFTGIIAAVGHIKAIEPKNGDWRLTLATGSLALSDVQLGDSIATNGVCLTAIELGADFFVADVSAETLGVTTLGSMKVGS
RVNLEKALRLADRLGGHLVSGHVDGVGEVLRVSQDARSWRFVISAPNTIAHYIAHKGSVCINGISLTVNHVDGHTFDVNI
VPHTMDNTTIVDWQVGTQLNLEVDLLARYLERLLQGQQAPAPSKITADFLASSGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 1e-48 55
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 1e-48 55