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Name : Thicy_0979 (Thicy_0979) Accession : YP_004537225.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1124440 - 1125729 bp Length : 1290 bp Strand : - Note : TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: tcx:Tcr_0768 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal DNA sequence : ATGTTAGATACCAAACGTCTTCGCAATGATATCAACCAAGTCTTGGCCAGTTTAGCCAAGCGCAACTTTTCGTTTGACTA TGCGCAGTTTCAAACCCTCGAAGCAAAACGCAAACAATTACAAACCGATACTGAAACCCTGCAAGCGCAGCGTAATCAAA GTGCGAAAGCTATTGGGCAGGCAAAAGCCAAGGGAGAAGATATTGCCCCGTTATTGACGTCGGTAGCGAGCTTAGGTGAA CAACTGGATCGTAACAAAGCAGAGCTTGACAGCGTTCAGAACCAACTGGATGAGATGTTGTTAGCGACTCCTAATTTGCC GCATGACTCCGTACCAGCAGGCCTAGATGAGTCGGGCAATATTGAGGTATCGCGCTGGGGTACGCCACGTAGCTTTGATT TTACACCACTGGACCATGTTGCCATTGCTGAGCAACGGGGTTGGTATGATAATGAGGCGGCTACCAAAATTACCGCCGGT CGTTTTTCGGTGTTAAAAGGGCCCTTGGCGCGATTACAACGTGCGCTTACCCAGTTTATGCTCGACCAACATACCCAGAT TCATGACTACGAAGAAGTTTATGTGCCGTATTTGGTGAACCAAGATAGCTTGTTTGGGACAGGGCAGTTGCCAAAGTTTG CTAAAGATCTGTACAAAATTGAAAAAGACGCCGAGCACGACACGGGTGACCGTGACCTCTACTTAATCCCAACCGCTGAA GTACCGATTACCAATCTGGTGCGCGGTGAGATTGTGCCTGCCGATCAACTGCCGTTAAAGTATGTGGGACATACCCCTTG TTTTCGCTCGGAAGCCGGTTCTTATGGTCGGGATGTAAAGGGCTTAATTCGCCAGCATCAATTTGAAAAAGTGGAATTGG TGCAGTTGGTTCATCCAAACGACTCCTATATGGCATTAGAGGCTTTAACAGAACACGCCGCCGCCATTTTGGAGGCACTT GAGTTACCCTATCGTAAAGTCCTATTGTGCGCCGGTGATATGGGTTTTTCAGCCGCAAAAACTTACGATTTAGAGGTTTG GTTACCAGGTCAGCAGGCCTATCGTGAAATCTCGTCCTGCTCTAATTTTGAAGATTTTCAAACCCGTCGAATGTTAGCAC GTTTCCGTGAAGACCAAGACAAGCCGCAGTTGCTCCATAGCTTAAATGGCTCTGGTTTGGCGGTTGGGCGCACCTTATTG GCGCTATTAGAAAACCACCAGCAAGCAGACGGAAAAGTAGCCATACCGACAGCTTTGCAGCCTTATATGGGCGGATTGAC GTTCATTTAA Protein sequence : MLDTKRLRNDINQVLASLAKRNFSFDYAQFQTLEAKRKQLQTDTETLQAQRNQSAKAIGQAKAKGEDIAPLLTSVASLGE QLDRNKAELDSVQNQLDEMLLATPNLPHDSVPAGLDESGNIEVSRWGTPRSFDFTPLDHVAIAEQRGWYDNEAATKITAG RFSVLKGPLARLQRALTQFMLDQHTQIHDYEEVYVPYLVNQDSLFGTGQLPKFAKDLYKIEKDAEHDTGDRDLYLIPTAE VPITNLVRGEIVPADQLPLKYVGHTPCFRSEAGSYGRDVKGLIRQHQFEKVELVQLVHPNDSYMALEALTEHAAAILEAL ELPYRKVLLCAGDMGFSAAKTYDLEVWLPGQQAYREISSCSNFEDFQTRRMLARFREDQDKPQLLHSLNGSGLAVGRTLL ALLENHQQADGKVAIPTALQPYMGGLTFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-90 | 51 |
