Gene Information

Name : PP1Y_AT5672 (PP1Y_AT5672)
Accession : YP_004533351.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 599956 - 601476 bp
Length : 1521 bp
Strand : +
Note : assigned by KAAS to KEGG Orthology:K00128 aldehyde dehydrogenase (NAD+)

DNA sequence : 
ATGCTGGAACAGGCCATGAGCAAATTCACCGGCGATTCGCTGATCCGCGAACGCTTCGACAACTTCATCGGCGGCAAGTG
GGTGGCCCCGGTCCGGGGCGAGTATTTCGACAATATCTCGCCCGTCACCGGCCAGGTCGTCTGCCAGGTCGCGCGCGGCA
CGGCGGAGGACATCGAACTTGCGCTCGATGCTGCCCATGCCGCCCGCGAGGCATGGGGCCGCGCCTCGACCATCGAGCGT
TCCAACACCCTGCTGAAGATTGCCGACCGAATGGAAGCCAATCTCGACAAGCTCGCGCTTGTCGAGACGATCGACAACGG
CAAGCCGATCCGCGAGACGACGGCTGCCGACATCCCGCTTGCGATCGATCACTTCCGTTACTTCGCCGCCTGCGTTCGCG
CGCAGGAAGGTTCGCTGGCAGAGATCGATCACGACACCGTGGCCTATCACTTCCACGAACCGCTCGGCGTGGTTGGCCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCGGCCTGGAAGCTCGCCCCGGCTCTCGCCGCGGGTAACTGCGTGGTGCT
CAAGCCTGCCGAGCAGACGCCGATGGCGATCATGGTGCTGGCCGAGATGATCGCCGACATCCTGCCTGCCGGGGTGCTCA
ACATCGTCAACGGCTTCGGCATCGAGGCCGGCAAGCCGCTTGCCACCAACAAGCGCATCGCCAAGATCGCCTTCACCGGC
GAGACGACGACCGGCCGCCTGATCATGCAGTATGCGTCGGAAAACCTGATCCCGTGCACGCTGGAACTGGGTGGCAAGAG
CCCCAACATCTTCTTCGCCGACGTGATGGCCGAGGACGACGACTTTCTCGACAAGGCGCTCGAAGGCTTCGCCATGTTCG
CGCTCAACCAGGGCGAGGTCTGCACCTGCCCGAGCCGGGCGCTCGTCCACGAATCGATCTACGACCGCTTCATGGAAAAG
GCGATTGCCCGGGTCGAGGCGATCAAGCTGGGCAGCCCGCTCGATCCTTCGACGATGATCGGCGCGCAGGCATCGAACGA
CCAGCTCGAGAAGATCCTGTCCTACATCGACATCGGCAAGGGCGAGGGCGCCAGGGTCCTCACCGGCGGCGAACGCTTCG
TGCAGGAAGGCGAGCTGGCCCAGGGATACTACATGCGCCCGACCGTCTTCGAAGGGCACAACAAGATGCGCATCTTCCAG
GAGGAGATCTTCGGTCCGGTTCTTTCCGTGACGAAGTTTTCCAGCGATGAAGAGGCGCTCGAGATCGCCAACGACACGCT
CTACGGTCTGGGCGCCGGCGTCTGGAGCCGCGACGGCACCCGTGCCTACCGCTTCGGTCGCGGTATCCAGGCGGGCCGCG
TGTGGACCAACTGCTACCATGCCTACCCGGCCCATGCGGCCTTCGGCGGCTACAAGCAGTCGGGCATCGGGCGCGAAACC
CACAAGATGATGCTCGACCATTACCAGCAGACCAAGAACCTGCTGGTCAGCTACAGTCCGAAGGCACTCGGTTTCTTCTG
A

Protein sequence : 
MLEQAMSKFTGDSLIRERFDNFIGGKWVAPVRGEYFDNISPVTGQVVCQVARGTAEDIELALDAAHAAREAWGRASTIER
SNTLLKIADRMEANLDKLALVETIDNGKPIRETTAADIPLAIDHFRYFAACVRAQEGSLAEIDHDTVAYHFHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPMAIMVLAEMIADILPAGVLNIVNGFGIEAGKPLATNKRIAKIAFTG
ETTTGRLIMQYASENLIPCTLELGGKSPNIFFADVMAEDDDFLDKALEGFAMFALNQGEVCTCPSRALVHESIYDRFMEK
AIARVEAIKLGSPLDPSTMIGAQASNDQLEKILSYIDIGKGEGARVLTGGERFVQEGELAQGYYMRPTVFEGHNKMRIFQ
EEIFGPVLSVTKFSSDEEALEIANDTLYGLGAGVWSRDGTRAYRFGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRET
HKMMLDHYQQTKNLLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-138 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-143 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-143 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-143 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-142 63
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-63 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP1Y_AT5672 YP_004533351.1 aldehyde dehydrogenase VFG0082 Protein 1e-138 65