Gene Information

Name : PP1Y_AT4347 (PP1Y_AT4347)
Accession : YP_004533205.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 451990 - 453444 bp
Length : 1455 bp
Strand : -
Note : assigned by KAAS to KEGG Orthology:K00135 succinate-semialdehyde dehydrogenase (NADP+)

DNA sequence :
ATGGCCTACACCGACTTCCTCAAGCAGCAGTGCTACATCGACGGCAAGTGGTGCGATGCCGATTCAGGGGCCACCTTCGA
AGTGACCGATCCCGGCAGCGGCAAGGTGCTGGGCACCGTACCCAAGATGGGCAAGGACGAGACCGCGCGCGCCATCGATG
CCGCGGAAGCGGCCCTGCCCGGTTGGCGCGCCAAGACCGCGGGCGAGCGCGCCAAGCTCCTGCGCAAGCTCTACGAACTG
ATGATGGAGCATCAGGACGACCTGGGCGAACTGCTCAGCCGCGAACAGGGCAAGCCCTTTGCCGAGGGCAAGGGCGAAAT
CGCCTATGGCGCAGGGTTCATCGAATGGTTCGGCGAAGAGGGCAAACGTGCCTATGGCGACGTCATCCCCAGCCATGCCG
CGGATCGCCGCATCGTCGTGATCAAGCAGGGCGTCGGCGTCGTGGGCGCGATCACGCCCTGGAACTTTCCCAATGCGATG
ATCACCCGCAAGCTCGGCCCGGCGCTGGCGGCGGGCTGCACCATCGTCATCAAGCCGGCGTCGGCCACGCCATACTCCGC
GCTCGCCATTGCCGCGCTGTGCGAGATGGCGGGCATTCCGGCCGGCGTCGTCAATGTCGTCACCGGCAGCGCGGGCCAGA
TCGGTTCGGAACTGACCGGCAATCCCAAGGTCGCCAAGATCACCTTCACCGGATCGACCGAGATCGGCCGCGACCTGCTG
CGAGAGAGCGCCGAGACGATCAAGAAGTGCTCGATGGAACTGGGCGGCAATGCGCCGTTCCTGGTCTTCGACGATGCCGA
TGTCGATGCCGCGATCGACGGCGCGATGATTTCCAAGTTCCGCAACGGCGGCCAGACCTGCGTGTGCACCAACCGCTTCT
ACGTGCAGGACGGCGTCTATGACGAGTTCGTCGACAAGCTGGCCAGGCGGGTTTCTGCGATGAAGGTCGGCTACGGCATG
GACTCCGGCACCGACATCGGTCCGATGATCGATGAAAAGGCGGTTGAGAAGGTCGAGGAACACCTCGAAGACGCCAAGGC
CGGCGGCGCCACCGTTCTGGCCGGCGGCCAGCGCAATGCGCTGGGCGGCACTTTCTTCAACCCGACCGTGATCGCAGGGG
TGAAGCCCGACATGAAGATCGCGCGCGAAGAGACTTTCGGCCCGCTCGCCGGCGTTATCCGCTTCAAGGACGAGGCGGAC
GCCATCGCCATGGCCAACGACACCGAATTCGGCCTCGCCAGCTATTTCTATGCACGCGACCTCAGCCGCGTGTGGCGCGT
CGCCGAAGCGCTGGAGGCGGGCATGGTCGGCATCAACACCGGCCTGATCTCCACTGAAGTCGCCCCCTTCGGAGGGGTCA
AGCAATCGGGACTCGGCCGCGAGGGTTCGCACTACGGCCTCGATGACTTCATGGAAGTGAAGTACCTGTGCATGGGCATC
CAGCCCAGCGCCTGA

Protein sequence :
MAYTDFLKQQCYIDGKWCDADSGATFEVTDPGSGKVLGTVPKMGKDETARAIDAAEAALPGWRAKTAGERAKLLRKLYEL
MMEHQDDLGELLSREQGKPFAEGKGEIAYGAGFIEWFGEEGKRAYGDVIPSHAADRRIVVIKQGVGVVGAITPWNFPNAM
ITRKLGPALAAGCTIVIKPASATPYSALAIAALCEMAGIPAGVVNVVTGSAGQIGSELTGNPKVAKITFTGSTEIGRDLL
RESAETIKKCSMELGGNAPFLVFDDADVDAAIDGAMISKFRNGGQTCVCTNRFYVQDGVYDEFVDKLARRVSAMKVGYGM
DSGTDIGPMIDEKAVEKVEEHLEDAKAGGATVLAGGQRNALGGTFFNPTVIAGVKPDMKIAREETFGPLAGVIRFKDEAD
AIAMANDTEFGLASYFYARDLSRVWRVAEALEAGMVGINTGLISTEVAPFGGVKQSGLGREGSHYGLDDFMEVKYLCMGI
QPSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 6e-138 64