Gene Information

Name : PP1Y_AT3701 (PP1Y_AT3701)
Accession : YP_004533147.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : bacteriophage gpQ
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 381710 - 382738 bp
Length : 1029 bp
Strand : +
Note : KEGG: lhk:LHK_02579

DNA sequence :
ATGAACCGCCGGGAAGCGGCCGAGGCATCGAAGGGCGCGCTGGTCGCCTCGAACGACAATCGCGGCCGCGCGATCGAGGC
GTTCACCTTCGGCGATCCGGAGCCGGTGCTGAACCGGGCGACGATGCTGGACATGTTGGAGTGCTGGCACAACCGGCGCT
GGTATGAGCCGCCGGTTTCGATGGATGGCCTGGCCCGTGCCTTTCGGGCATCGCCGCACCATTCGAGCGCGATCATCCTC
AAGCGCAACATGCTGGCCGCCAGCCTCGATCCCACACCCCAACTGAGCCGCCGCGCGTTTGCCGGGATGGTCCAGGACTA
CCTTGTCCTGGGCAACGCCTACGTGCGCGAGATCCGCAACCGCCTGGGCGAAGTGATGCGTCTCGAGCATTGCCTCGCCA
AGTACACGCGGCGCGGGGTGGAGCCGGGCCACTTCTGGTGGGTGCCGGGTTACCAGCAGGAAGAGGAGTTCGAGCAGGGC
ACCGTTCACCAGCTGATGGCGCCCGACATCAATCAGGAGATCTATGGCTTGCCGGAATACCTCTCCGCGCTGCAGTCCGC
CCTGCTCAACGAGAACGCCACCCTGTTCCGTCGCCGCTACTACGAAAACGGCAGCCACGCCGGCTACATCCTCTACGCGA
CGGGCGAATTCGCCAACGGCGACGTCGACGCCATGCGCGAGGCGCTGAAGAAGTCAAAGGGCCCGGGCAACTTCCGCAAC
CTGTTCGTCCATGCCGCGAACGGCAAGGAAACCGGCATCAAGCTGCTGCCGATCGCCGAAGTCGCCGCAAAGGACGAATT
CCTGGGCATCAAGAACACCACTCGCGACGACGTCCTCGCCGCCCACCGCGTACCGCCCCAGCTGCTCGGCATCGTGCCGG
CAAATGCGGGCGGTTTCGGCGATGTGACGAAGGCGACGGATGCGTTCTTCGAGCTGGAGATCGCGCCGCTGCAGTCGGTG
TTCCTGGAACTGAACGACGTGCTTGGGTTCGAAGCGGTGCGGTTTTGGGAGCGAGCGACGGCGGCTTGA

Protein sequence :
MNRREAAEASKGALVASNDNRGRAIEAFTFGDPEPVLNRATMLDMLECWHNRRWYEPPVSMDGLARAFRASPHHSSAIIL
KRNMLAASLDPTPQLSRRAFAGMVQDYLVLGNAYVREIRNRLGEVMRLEHCLAKYTRRGVEPGHFWWVPGYQQEEEFEQG
TVHQLMAPDINQEIYGLPEYLSALQSALLNENATLFRRRYYENGSHAGYILYATGEFANGDVDAMREALKKSKGPGNFRN
LFVHAANGKETGIKLLPIAEVAAKDEFLGIKNTTRDDVLAAHRVPPQLLGIVPANAGGFGDVTKATDAFFELEIAPLQSV
FLELNDVLGFEAVRFWERATAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 2e-87 56
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 2e-87 56
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 7e-77 55