Gene Information

Name : PP1Y_AT3596 (PP1Y_AT3596)
Accession : YP_004533135.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : putative phage baseplate assembly protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 369667 - 370560 bp
Length : 894 bp
Strand : -
Note : KEGG: sml:Smlt1049

DNA sequence :
ATGGCCGATGCTACCTTCACCGCTGTCGATCTGTCGCGCCTGCCTGCGCCCGATATCGTCGAGGAACTGGATTTCGAAAC
CATCCTTGCCGATGCCGTCGCGCGCATGCAGGCGCAAATGCCGGAGTTCATCACGCGTGACAGCGATCCGGCCACCAAGC
TGCTGCAGGTGTTCGCCTATTTCGCCCAGCTGCTGCGCCAGCGCGTCAACGATGCCGTGCGCGCCGTCATGCCCGCCTAT
GCGGTTGGCGCGGATCTCGACAACATCGCCGCCCTCTTCGGCATCACCCGCTTTACCCTGGCCTCGGCCGACGAGGCGCT
GGGCATTCCCGCCGTCATGGAAAGCGATGCCGATTTCCGCCGTCGCATGGTGCTGGCGCCGGAAGGCTATTCGGTCGCCG
GGCCGGAAGGCGCCTATATCTTCCACGCCTTGTCGGCCGATGCCGATGTGCTGGATGCCAGCGCCACCAGCCCGGCCGCA
GGCGAAGTGCTGGTCTCCGTCCTCTCCCGCACCGGCTCGGGCGCAGCTTCGGCCGCGCTCGTCAGCAAGGTTGCCGCCTA
CGTCTCGGACGAAACGCGCCGCCCGCTGACCGATTTCGTCACCGTCCAGTCGGCAGAGATCGTCACTTATGCCGTGGAGG
CTACGCTCACCACTTTCAGTGGCCCCGATGGCGGCGTCGTCCTCGCCGCCGCGCACGCCAATCTCGATGCCTACATCGCG
AGCAGCCACCGCCTTGGCCGTGACATTACCCGCTCAGCCATCTTCGCCGCCCTCCATGTTGAAGGCGTGCAGAATGTCGA
ACTCAGCGCCCCCGCTGCCGACATCATCGTTTCGCGCACGCAGGCGCCGCACTGCACCGGCACCACGATCAATTACGCCG
GGACCGGCGAATGA

Protein sequence :
MADATFTAVDLSRLPAPDIVEELDFETILADAVARMQAQMPEFITRDSDPATKLLQVFAYFAQLLRQRVNDAVRAVMPAY
AVGADLDNIAALFGITRFTLASADEALGIPAVMESDADFRRRMVLAPEGYSVAGPEGAYIFHALSADADVLDASATSPAA
GEVLVSVLSRTGSGAASAALVSKVAAYVSDETRRPLTDFVTVQSAEIVTYAVEATLTTFSGPDGGVVLAAAHANLDAYIA
SSHRLGRDITRSAIFAALHVEGVQNVELSAPAADIIVSRTQAPHCTGTTINYAGTGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 9e-54 51
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 9e-54 51
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 1e-38 46