Gene Information

Name : PP1Y_AT35890 (PP1Y_AT35890)
Accession : YP_004536127.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : 1.1.1.3
Position : 3768735 - 3770042 bp
Length : 1308 bp
Strand : -
Note : assigned by KAAS to KEGG Orthology:K00003 homoserine dehydrogenase

DNA sequence :
ATGGTAGAACCGCTCAATATCGCGCTTGCAGGTCTGGGTACCGTCGGTACCGGCGTCGTCCGTCTCATCGAGACCAATGC
GGAGCTCATTGCCCGCCGTGCAGGGCGTCCGATTCGCATTGCCGCGGTGAGCGCGCGCGACCGTACCAAGGATCGCGGCG
TCGACCTGACGCAGTACACCTGGGAAGACGATCCGGCCGCGCTTGCCGCCCGCGAGGACGTCGATGTCGTCGTGGAACTG
GTCGGCGGCTCCGATGGTCCGGCGCTGTCCCTCGCTCGCAAGGCGATCGGCAATGGCAAGGGGTTGGTCACCGCCAACAA
GGCGATGATCGCGCACCACGGCCTTGAGCTGGCCTCGGCGGCAGAGGGTGCCGGCGTCGCCCTCAAGTTCGAAGCCGCGG
TCGCGGGCGGTATTCCGGTGATCAAGGGCCTGAGCGAAGGCGCCGCTGCGAACAAGATCGAGCGCGTCTATGGCATTCTC
AACGGAACCTGCAATTACATCCTCTCCACGATGGAGGATACGGGCCGCGATTTCACCGACGTTCTCGAGGAAGCGCAGCG
CCTCGGTTATGCCGAGGCCGATCCGACCTTCGACATCGAAGGCATCGACGCCGCGCACAAGCTGTCGATCCTCGCCGCCA
TCGCCTTCGGTTCGCGCCTGCGTTTCGATGCCGTCGAAACCATGGGCGTTTCGCCGGTCAAGGCTGCTGACATCGAGCAG
GCCCGCTCGCTGGGTTACGTCATCCGCCTGATCGGCATGGCCGAGATCGACCGGCTCGATGGCGGGGTCGGCCTGTTCCA
GAGGGTGCGGCCGCATCTGGTCCCGATCGACCACCCGCTCGCGCATGTCGACGGGGCTACCAATGCCGTCGTCGCCGAAG
GCAATTTCATGGGGCGCCTGCTGTTCCAGGGGGCCGGTGCTGGCGACGGACCGACGGCCAGCGCCGTGGTCGCCGACATT
ATCGACATCGCCCGCGGCGAAAAGGGCGCGGCTTTCTCGATGCCCGCAAGCGAGCTTGAGGACATTGCACCGGCGCCGAC
CGGCCATCGGTTCGGCCGATCCTACCTGCGCTTCATCGTCCATGACCGTCCGGGCGTGCTTGCCGAGATCACCGCCGCCA
TGCGCGATGCCGGCGTCTCGATCGAGAGCCTGATCCAGAAGGCGCCGTCGGACGACGCCGGCGAAGTGATCATCGCCGTT
GTCACCCATGAAGGTCCGGAATCGGCCGTTACCGAGGCAATGCGCATTCTCGATGGCTCGGACAGCCTGGCGGGCCAGCC
GCTGGTAATGCAGATCATCGCCAATTGA

Protein sequence :
MVEPLNIALAGLGTVGTGVVRLIETNAELIARRAGRPIRIAAVSARDRTKDRGVDLTQYTWEDDPAALAAREDVDVVVEL
VGGSDGPALSLARKAIGNGKGLVTANKAMIAHHGLELASAAEGAGVALKFEAAVAGGIPVIKGLSEGAAANKIERVYGIL
NGTCNYILSTMEDTGRDFTDVLEEAQRLGYAEADPTFDIEGIDAAHKLSILAAIAFGSRLRFDAVETMGVSPVKAADIEQ
ARSLGYVIRLIGMAEIDRLDGGVGLFQRVRPHLVPIDHPLAHVDGATNAVVAEGNFMGRLLFQGAGAGDGPTASAVVADI
IDIARGEKGAAFSMPASELEDIAPAPTGHRFGRSYLRFIVHDRPGVLAEITAAMRDAGVSIESLIQKAPSDDAGEVIIAV
VTHEGPESAVTEAMRILDGSDSLAGQPLVMQIIAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 2e-45 49
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 2e-45 49