Gene Information

Name : PP1Y_AT3470 (PP1Y_AT3470)
Accession : YP_004533121.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : phage-related tail protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3500
EC number : -
Position : 356438 - 357460 bp
Length : 1023 bp
Strand : -
Note : KEGG: xoo:XOO1689

DNA sequence :
ATGACTCAGGCGATCACCAATATCCCGGACTGGCGCGTAACGCTCGATGGCAAGGACCTGACAGAGCGCATGCGCCCGCG
CCTGGTCTCGCTCACCATTTCCGAAAAGCGCGGGGACGAGGCCGATCAGCTGGACATCGTGCTGGACGATACGGACGGCG
GGCTGGCGATCCCAAAGGAAGGCGCGCTGCTGACCGTAGCACTGGGCTGGAAGCAGGGCCGCGATGTCACGCCCGGCCTG
ATCGACAAGGGCAGCTACAAGGTTGACGATGTCACCCATAGCGGCCCGCCCGATCAGATCCGGATTCGGGCCCGCGCAGC
GGACTTTACCAGCCAGATCCGCAACCGCCGCGAACAGAGCTGGAAGAACACCACGCTGGGCGCAGTGCTTCAGGATATCG
CCGGCAGGAACGGCCTGACACTGAAAGTGGCCGCCGATATGGCTGCAACCGCACTATCCTCGATCAGCCAGAGCCGCGAA
AGCGATGTGGCTTTCCTGCGCCGCTTGGGGCGAGAATACGATGCGGTGGCCACCATCAAGGACCGGCACCTGATCTTCGC
ACGCAAGGGCGCGGGAACGACCGCCAGCGGCAAGGCGCTGCCCACGCTCACCCTGACCCGCCGCAGCGGAGACGGCCACA
ACTGGCAGCGGCAAAAGCGGGATGGGCAGGAAGGGGTGACCGCCAGCTGGCATGACCGGAAGGACGCGAAACGAAAGACC
ATTACCGTGGGCAAGGCGGACGGCGCGAAGAAGCTGCGCAAGGTCTATCCGGACGAAGCCTCAGCCAAGCGCGCGGCCAT
AGCCGAGCGGGACAGGCTCAAGCGCGCGCCCGCCACGCTGGACCTGAAACTGGCGCTGGGCAGGCCGGATGCCTACCCGG
AATGCCGGGTTACCGCGTCAGGCTTCAAGGATGAGATCGACGCGACGACCTGGCTGATTTCCGAGGTCACCCACCGTCTC
GATAATGGCGGGGGCTATGCGTCCGATCTGAAATTGGAAACAGCACCCCGATTCTCGGCCTGA

Protein sequence :
MTQAITNIPDWRVTLDGKDLTERMRPRLVSLTISEKRGDEADQLDIVLDDTDGGLAIPKEGALLTVALGWKQGRDVTPGL
IDKGSYKVDDVTHSGPPDQIRIRARAADFTSQIRNRREQSWKNTTLGAVLQDIAGRNGLTLKVAADMAATALSSISQSRE
SDVAFLRRLGREYDAVATIKDRHLIFARKGAGTTASGKALPTLTLTRRSGDGHNWQRQKRDGQEGVTASWHDRKDAKRKT
ITVGKADGAKKLRKVYPDEASAKRAAIAERDRLKRAPATLDLKLALGRPDAYPECRVTASGFKDEIDATTWLISEVTHRL
DNGGGYASDLKLETAPRFSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13490.1 phage late control D Not tested PAGI-6 Protein 4e-54 45
STY4601 NP_458684.1 putative regulator of late gene expression Not tested SPI-7 Protein 8e-66 41
t4295 NP_807892.1 regulator of late gene expression Not tested SPI-7 Protein 8e-66 41