Gene Information

Name : PP1Y_AT31768 (PP1Y_AT31768)
Accession : YP_004535748.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 3338632 - 3340110 bp
Length : 1479 bp
Strand : +
Note : assigned by KAAS to KEGG Orthology:K00135 succinate-semialdehyde dehydrogenase (NADP+)

DNA sequence :
ATGGCAAGCACAAGACCCTCGCTAGCCGAAGACGTCGTCCTTCGGACCACGCCGATTATCGACGGCCTGCCCCCTGCGGG
CAAGGGCTGCGTCTTCACGGTGACGAACCCGGCTACCACCCAAACTATCGCGACCATACCACTGCTGGGCGCGGAGGCGG
CCGAACGCGCCGTGGCCAGCAATGCTGCCGCCCTGCAGGAATGGCGCAAACGCGCAGCGGCCGAACGCGCCGACATCCTG
TTGGCCTGGCATGGCCTGATCCTGCAAAACCGTGAAGACCTGGCCCGGCTGCTGACCAGCGAACAGGGCAAGCCCCTGAA
CGAAGCGCGGGGCGAGATCGACTATGCCGCCAGCTTCGTGCGCTGGTTTGCCGAAGAGGCGCGGCGCGTTTACGGCGAGA
TCATCCCCGCCGCGCGCGAGCGCCGGGTCATGGTCATCAAGCAGCCGGTCGGCGTGGTTGGTGCCATCACGCCGTGGAAT
TTTCCGGCCGCGATGATTACCCGAAAGGTTGCCCCCGCGCTCGCCGCAGGATGCACCGTCACACTCAAGCCGGCGGAACT
GACCCCGCTTTCGGCTTTCGCTCTCGCCCACCTCGCGCTCGATGCAGGCGTCCCACCGGGCGTCTTCAACGTCATCGCGG
GGGATGCTCCGGCGATCGGTTCGGTGCTGACGAGCGATCCGACCGTCGCCAAGTTCACCTTCACCGGTTCGACCGCGGTC
GGCAAGCTGCTGACGGCGCAATGCGCCACAACCCTCAAGCGGGTCTCGATGGAACTGGGCGGCAACGCCCCTTTGATCGT
CTTTGACGACGCCGATATCGATACGGCTGTCGAAGGCGCGATCGCCTCCAAATTCCGCAACACCGGACAAACCTGCGTCT
GCGCCAACCGCATCCTGGTGCAGAGCGGCATCCATGACCGGTTCGCCGAAGCCCTGGCCGCGAGGGTCGCGGCCTTCCGG
GTCGGCAACGGCCTTGAAGGCGAGACCGACCAGGGCCCGCTGATCACCGCCGCCGCCTTGCAGAAGGTCCGCGACCATGT
CGGCGATGCCGTCGGGCGCGGCGCCCGGATCGTCACGGGCGGAGAACGCCATGAAGCCGGCGAACTGTTCCACCAGCCCA
CGGTCCTGATCGGCGCCAACCCCGACATGCGGCTGGCGCAGGAGGAGACGTTCGGCCCGGTCGCGCCGCTCTTCCGCTTC
GCAAACGAGGGCGAAGCCCTGGCCCTGGCCAACAGCACCCGTTCCGGCCTTGCCGCCTATGCGTTCACGCGCGACATGGA
CCGGTTCTGGCGACTCGCCGAAGGTCTCGAGGTTGGCATGGTCGGCTTCAACAACGGCATCATTTCCTCGGAAACCGTGC
CTTTCGGCGGGGTCAAGGAATCGGGTCTGGGGCGCGAGGGATCGCGTCACGGCATTGACGAATTCCTGGAACTCAAGGCC
ATCAGTCTCGGCTTGCCGCCGCAACCCGGAATTGAATAG

Protein sequence :
MASTRPSLAEDVVLRTTPIIDGLPPAGKGCVFTVTNPATTQTIATIPLLGAEAAERAVASNAAALQEWRKRAAAERADIL
LAWHGLILQNREDLARLLTSEQGKPLNEARGEIDYAASFVRWFAEEARRVYGEIIPAARERRVMVIKQPVGVVGAITPWN
FPAAMITRKVAPALAAGCTVTLKPAELTPLSAFALAHLALDAGVPPGVFNVIAGDAPAIGSVLTSDPTVAKFTFTGSTAV
GKLLTAQCATTLKRVSMELGGNAPLIVFDDADIDTAVEGAIASKFRNTGQTCVCANRILVQSGIHDRFAEALAARVAAFR
VGNGLEGETDQGPLITAAALQKVRDHVGDAVGRGARIVTGGERHEAGELFHQPTVLIGANPDMRLAQEETFGPVAPLFRF
ANEGEALALANSTRSGLAAYAFTRDMDRFWRLAEGLEVGMVGFNNGIISSETVPFGGVKESGLGREGSRHGIDEFLELKA
ISLGLPPQPGIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 8e-124 58
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 8e-77 42