Gene Information

Name : PP1Y_AT31483 (PP1Y_AT31483)
Accession : YP_004535720.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3308944 - 3309813 bp
Length : 870 bp
Strand : +
Note : KEGG: rhi:NGR234_166

DNA sequence :
ATGAACGCAGCTCCCATGATCGATGCACAGCGCCTCAGCCTCATGCTCAACGAGCTGCGCCTGCCCACCATCAAGCACAT
CTGGGGGGACTTTGCCGCCCAGGCGGACAAGGAAGGGTGGCCGGCCAGCAGGTTCCTCGCCGCGCTCGCCGAACACGAAC
TCGCCGAACGAGATCGCCGCCGGATCGAGCGTCATCTGGCAGAGGCCCATCTGCCCGCGGGCAAGACCCTGGACTGCTTC
GCCTTCGATGCCGTGCCGATGATCTCCAAGGCTCAGGTCATGGCCCTGTGCGCCGGCGATGGCTGGCTCGAGCAAGGCGC
CAACCTCATCCTGTTCGGTCCGCCCGGCGGCGGCAAAACCCATCTTGCCGCGGCAATCGGCCTCGCACTGGTGGAACGGG
GCTGGAGGGTTCTGTTCACCCGAACTTCCGACCTCGTGCAACGCCTGCAGGTCGCGCGGCGCGAACTCGCACTTGAATCC
GCCATGGCCAGGCTCGACAAATACCACCTGCTCATTCTCGACGACTTCGCCTACGTCTCGCGCGATCAGGCCGAGACGTC
GGTGCTCTTCGAGCTGATCAGCGCACGCTACGAGCGACGGTCGTTGCTGATCACCGCCAACCAGCCCTTCGGCGAATGGA
ACAGGGTCTTCCCCGATCCCGCGATGACGCTCGCCGCCGTGGACAGGCTCGTGCACCATGCCACCATCTTCGAGATGAAC
GTCGAAAGTTACCGGCGGCGCACCGCACAGGCCAGGCGCACCGGTGCCGGGCGCCCCGCCGCCTACACCACGCCAAAGGT
CCTCGAGACCATCCGCGACAATCAGGATGAGAACGACGACCTTGCCAGCGACAATCAAAACAGGCACTGA

Protein sequence :
MNAAPMIDAQRLSLMLNELRLPTIKHIWGDFAAQADKEGWPASRFLAALAEHELAERDRRRIERHLAEAHLPAGKTLDCF
AFDAVPMISKAQVMALCAGDGWLEQGANLILFGPPGGGKTHLAAAIGLALVERGWRVLFTRTSDLVQRLQVARRELALES
AMARLDKYHLLILDDFAYVSRDQAETSVLFELISARYERRSLLITANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMN
VESYRRRTAQARRTGAGRPAAYTTPKVLETIRDNQDENDDLASDNQNRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-42 44
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP1Y_AT31483 YP_004535720.1 transposase VFG1729 Protein 2e-42 44