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Name : PP1Y_AT31468 (PP1Y_AT31468) Accession : YP_004535719.1 Strain : Novosphingobium sp. PP1Y Genome accession: NC_015580 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 3307442 - 3308947 bp Length : 1506 bp Strand : + Note : KEGG: swi:Swit_5071 DNA sequence : GTGGCCGGCCGACACATCAACGATCATCAGGTGAGACTTTTCATGACCAACAGACGTAATAACCCCGTCGCTCTGGCGGC GGCGAAGGCCGGGTTCAGCCCGGCGACGGGCTATCGGGTTTTGCAGGACGCCCGGTTGCCATCACAGCGGCAAACACCGC GCAGCCGGCGCCGGCCCGATCCCCTTGCCGGTATCTTCGATGAAGTGGTGGTGCCGATGCTGGAGGCTGCTCCCGGCCTT CGGCCCATAGCGATCTTCGAGGAACTGCGGCGCCGATATCCCGAGACCGTGTTCGGCTCCCGGCGAACCCTGGAGCGGCG CATTCGCGACTGGCGCGCCATGAACGGGCAAGATCGCGAAGTCATTTTCCGGCAAGTGCACGAGGCGGGGCGGCTCGGCC TGTCCGATTTTACGTGCATGGACGATCTGGCAGTTTCGATCGCCGGACAGCCGCTGGACCACCTGCTCTATCACTTCCGG CTGCCTTGCGGCGGCTTCGAGCACGGACACGTCATCCTGGGCGGCGAGAGTTTCGTTGCCTTGGCCGAAGGGCTGCAGAA CGCGCTCTGGTCCGCAGGCGGTGCGCCGAAGCTTCATCGCACCGATAGCCTGTCAGCCGCCTTCCGCAATCTGGACGCCG ATGCCAAGATCGACCTGACCAGGCGCTATGACGCGCTCTGTGCCCATTATGGAATGGAGCCCACGAGGAACAACCGGGGC ATTGCCCATGAGAACGGCGCGATCGAGAGTGCCCATGGCCATATCAAGGCTGCCGTGAAGGATGCGCTGCTGCTGCGCGG TAGCGGCGACTTCGCCGACCTTGCCGACTATCGCCGCTTCATCGACGAGGTCGTAAATGCGCGCAACCGGCGGCACGGCC CCGGGATCGATGCCGAACGCAAGTTCCTGCAGCCGCTGCCGGACGTGCGCACCACCGACTACGAGGAGATCCTCGTGACG GTCACGTCCTCGGGCGGCTTCACGCTGCGCAAGGTGTTCTACACGGTCCCATCCCGCCTGATCGGGCACCGTTTGCGGGT CCGCCTGTATGATGACCGCCTCGACGTCTTCATCGGCGGCACGAGGCTCATGACCCTGCCGCGCGGCCGCGCGGGCATGA ACGGGAAGCACGGCCACGTCGTCGATTACCGCCACGTGATCCATTCCCTGCGCCGCAAACCCATGGCGCTGCTGGGCCTG GTCTATCGCGACAGCCTGTTCCCGCGAGATGCCTATCGCCTGATGTTCGACCACTTGCTGGAAGTTCAAGGCGAGCGGGA GGCATGCCGCACTACCGTCGCACTTCTGGCCATGGCCCACGAACGCGCCTGCGAGGCCGAGCTCGCCGCGCTCCTGACCG AGGATCTGACCGCGCGCCGAACACCGTGCCTGACAACCTTGCGGGCCCGGTTTAGTCCGGACCCTGCCGATCTGCCCGAA GTCGTGGTCCAACTGGTGCCGCTCTCGATCTACGACGGACTGATCGAACAGGGAGAAGCCGCATGA Protein sequence : MAGRHINDHQVRLFMTNRRNNPVALAAAKAGFSPATGYRVLQDARLPSQRQTPRSRRRPDPLAGIFDEVVVPMLEAAPGL RPIAIFEELRRRYPETVFGSRRTLERRIRDWRAMNGQDREVIFRQVHEAGRLGLSDFTCMDDLAVSIAGQPLDHLLYHFR LPCGGFEHGHVILGGESFVALAEGLQNALWSAGGAPKLHRTDSLSAAFRNLDADAKIDLTRRYDALCAHYGMEPTRNNRG IAHENGAIESAHGHIKAAVKDALLLRGSGDFADLADYRRFIDEVVNARNRRHGPGIDAERKFLQPLPDVRTTDYEEILVT VTSSGGFTLRKVFYTVPSRLIGHRLRVRLYDDRLDVFIGGTRLMTLPRGRAGMNGKHGHVVDYRHVIHSLRRKPMALLGL VYRDSLFPRDAYRLMFDHLLEVQGEREACRTTVALLAMAHERACEAELAALLTEDLTARRTPCLTTLRARFSPDPADLPE VVVQLVPLSIYDGLIEQGEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67386.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 9e-69 | 44 |
| unnamed | AAL67341.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 7e-69 | 44 |
| c3607 | NP_755482.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 7e-70 | 44 |
| c5144 | NP_756992.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 7e-70 | 44 |
| r6 | AAC61728.1 | transposase R6 | Not tested | PAI I CFT073 | Protein | 9e-69 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP1Y_AT31468 | YP_004535719.1 | integrase catalytic subunit | VFG1728 | Protein | 3e-70 | 44 |
