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Name : PP1Y_AT2797 (PP1Y_AT2797) Accession : YP_004533068.1 Strain : Novosphingobium sp. PP1Y Genome accession: NC_015580 Putative virulence/resistance : Unknown Product : putative type I restriction enzyme Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 294871 - 296733 bp Length : 1863 bp Strand : + Note : KEGG: rle:pRL110098 DNA sequence : ATGGTTGATCAGGCGAACAAGGACGGGTTTCTGGAGGCGTTGACGCAGCTTGGCGGCGCAGCCGGGAATGTCCGCCTGCG TGACACTCTGCAATGGGACGAAGAAGTCTACTCCAACGTCAAAGACGCACTGATTGAATCCGGCGCGATCCTGTCCGGGC GGGGACGCGGTGGGTCCGTCTCACTGGCAGTCGGAGACAGCAGTGAGGTTCAGGCACGCCCCGCGTCCGTACCTAAGCCC CAGAAAGCAAAAGCGGCCAAAGCAAGCAGCAATTCCGGCGGCGATCTTGGCTTCGAGGCGGATCTGTTCAAGGCGGCGGA CAAGCTGCGTGGCAATCTGGAACCGTCAGAATACAAGCATATCGCGCTTGGCCTGATCTTCCTGAAATACATTTCTGAGG CCTTCGAAGCACAGCATACCCGGCTGTCGGGAGAGGACTATGCCGACCCGGAGGATCCCGAAGAATATCTCGCCGCCAAC GTGTTTTGGGTGCCGCCGGAAGCACGCTGGGCGCACTTGCAGGCCAATGCCAAGCGCCCTGAAATCACGTTTGTTGACGT AACCACCGGCCGCGAAAAGAAGGGCGACATCGGCGGGCTGATCGACAATGCGATGGAGGCAATCGAACAGGCCAACATTA AGGTGCTGAAGGACGTCCTGCCCAAAAACTACTCCCGTCCACAGCTGGACAAGACCATGCTGGGCGAGCTTATCGACCTG TTTTCCAACGTCGATATGCGCGGTGATCATGGGCAAGCACGCGACCGGCTCGGCCGGGCTTATGAATACTTCATCTCGCA GTTTGCCGGGGCGGAAGGCCGGCGCGGCGGCGAGTTCTATACGCCTCGCTCGGTGGTCCAGACCATCGTCGAGATGCTCG AACCCGGTCAGGGACGCGTCTACGACCCATGTTGCGGCTCGGGCGGCATGTTCGTGCAGTCCGAGCGATTCATCGAGGAC CATCAGGGTCGCCGATCGGACATTGCCATCTATGGTCAGGAGCGCAACCACACCACTTGGCGCCTCTGCCGCATGAACCT GGCCGTACGCGGAATCGACGCCGACATTCGCTGGAACAATGAAGGCAGCTTCCTGCGTGACGAGTTCGCCCAAACGAAGT TCGACTTCGTCATGGCCAACCCGCCGTTCAACATCTCCGACTGGTGGCAGCCGCAACTGGAGGGCGACGCGCGCTGGTCC TTCGGCACGCCGCCGCAGGGCAACGCAAACTTCGCTTGGCTGCAGCACATTCTGCACCATTTGGCACCGCGCGGCACGGC CGGCGTAGTACTTGCCAACGGCTCGATGTCATCGCAGCAATCGGGCGAAGGCGAGCTGCGCAAGGCACTGATCGAGGCCG ACCATGTCGACTGCATGGTCGCCCTGCCGGGCCAGCTGTTCTACTCGACCCAGATCCCCGCCTGCCTGTGGTTCCTTGCC CGAGACAAGAGCGCCAACGGCCACCGCGACCGCCGGGGTGAGATCCTGTTCATCGACGCCCGCAAGCTGGGCCATCTGGT TGACCGAACCCGGCGGGAATTCTCCGTCGAAGACATCTCCCTGATCGCCGACACCTACCACCGCTGGCGGGGCAAGCCTG AAGAGGTAGCGGCGGCCGGGCTGCAACCCTACGCCGACGAGCCCGGATTCTGCCGTTCAGCGACGCGGGACGAGGTGCGT GGCCATGGCCATGTCCTGACCCCTGGCCGTTACGTCGGTGCCGCAGACTTGGAGGACGATGGGGTCAGTTTCGAGGAACG GTTCGGGGGTCTTCGGGCGAAGCTGGCAGAGCAGTTTGAGGCGGGGCGAGTGCTGGAGGCGCGGATTGAGGCGGCGCTGG GAAAGACTTACGCCGTTGAGTAG Protein sequence : MVDQANKDGFLEALTQLGGAAGNVRLRDTLQWDEEVYSNVKDALIESGAILSGRGRGGSVSLAVGDSSEVQARPASVPKP QKAKAAKASSNSGGDLGFEADLFKAADKLRGNLEPSEYKHIALGLIFLKYISEAFEAQHTRLSGEDYADPEDPEEYLAAN VFWVPPEARWAHLQANAKRPEITFVDVTTGREKKGDIGGLIDNAMEAIEQANIKVLKDVLPKNYSRPQLDKTMLGELIDL FSNVDMRGDHGQARDRLGRAYEYFISQFAGAEGRRGGEFYTPRSVVQTIVEMLEPGQGRVYDPCCGSGGMFVQSERFIED HQGRRSDIAIYGQERNHTTWRLCRMNLAVRGIDADIRWNNEGSFLRDEFAQTKFDFVMANPPFNISDWWQPQLEGDARWS FGTPPQGNANFAWLQHILHHLAPRGTAGVVLANGSMSSQQSGEGELRKALIEADHVDCMVALPGQLFYSTQIPACLWFLA RDKSANGHRDRRGEILFIDARKLGHLVDRTRREFSVEDISLIADTYHRWRGKPEEVAAAGLQPYADEPGFCRSATRDEVR GHGHVLTPGRYVGAADLEDDGVSFEERFGGLRAKLAEQFEAGRVLEARIEAALGKTYAVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 9e-133 | 55 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-133 | 55 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-131 | 54 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 6e-111 | 47 |
