Gene Information

Name : PP1Y_AT28774 (PP1Y_AT28774)
Accession : YP_004535475.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 3022096 - 3024084 bp
Length : 1989 bp
Strand : -
Note : assigned by KAAS to KEGG Orthology:K00615 transketolase

DNA sequence :
ATGACCCTCGCCCCCAACCGCCTCGCGCCGATGGCCAATGCCATCCGGGCGCTTTCGATGGATGCGGTCCAGGCTGCCAA
CAGCGGTCACCCCGGCATGCCGATGGGCATGGCGGACGTCGCCACGGTGCTGTTCTCCAAGTTTCTCAAGTTCGATCCCG
CCGCGCCAAAGTGGGCCGACCGCGACCGCTTCGTGCTCTCGGCCGGCCACGGCTCGATGCTGATCTACTCGCTGCTCCAC
CTGACCGGCTATGCCAGCCCGACGATGGACGACATCCGCAACTTCCGTCAGCTCGGCTCGGTCTGCGCCGGTCACCCGGA
AAACTTCCTGATCCCGGGCGTGGAATGCACCACCGGTCCGCTGGGGCAGGGCCTGGCGATGGCGGTCGGCATGGCGATGG
CCGAGCGTCAGCTCAACGGCACTTTCGGTGACGACCTCGTCGACCACAAGACCTGGGTCATCGCCGGTGACGGCTGCCTC
ATGGAAGGCATCAACCACGAGGCGATCGGCCTGGCCGGCAACCTCAAGCTGGGCCGCCTCAAGGTCCTGTGGGACGACAA
CAACATCACCATCGACGGCGATACCTCGTTGTCGACGAGCGAAGACATCCCCGCGCGCTTCCGCGCTACCGGTTGGGACG
TTTTCTCGTGCGACGGCCACGACTTTGCCGATATCGAGCGTGCGCTGGCCGAAGCCGCTGCCTCGGACAAGCCCTCGCTC
GTTGCCTGCAAGACGGTGATCGGCAAGGGCGCACCCAACAAGCAGGGCAGCCATGACGTTCACGGTGCTGCGCTCGGCCC
CGATGAAGTCGCCGCCGCTCGTGAATTCCTGGGCTGGACGGCAGCTCCGTTCGAGATCCCGGCCGAGATCCTTGCCGACT
GGCGTTCGCTGGGCGAAGCCGGGGCCAAGGCCCGCGCCGAGTGGGAAGGCCGCCTGGCCGCCAGCGCCGACGCTGCCGAA
TTCAACCGCCGCATGGCCGGCGATCTTCCGGAAGGCGACGAGGCTGCGAAGACTTTCGCCGGCTGGCTCGACGGCGACAC
CACCGTCGCTACCCGCAAGGCTTCGGAAAACTGCCTCAACGTCCTGGCGCCGGTGGTGCCCGAGATGGTTGGCGGTTCGG
CCGACCTTACCGGCTCGAACAACACCAAGGCCAAGTGCCAGGAGCCGTTCACCCCGGAAAACTACGCCGGTCGCTATGTC
TATTACGGCATCCGCGAATTCGGCATGGCCGCGGCGATGAACGGCATGGCGCTGCATGGCGGCGTCATTCCCTACGGCGG
CACCTTCCTGATCTTCTCGGACTACTGCCGCAATGCGATCCGCCTCTCGGCGCTGCAGCAGACCCGCGCGATCTACGTCC
TGACCCACGATTCCATCGGCCTGGGCGAAGACGGTCCGACCCACCAGCCGATCGAGCAGGTCATGAGCCTGCGCCTGATC
CCGAACCTCTACGTGTTCCGCCCCGCGGACGTGATCGAGACGGCAGAGTGCTGGAACATCGCGCTGCAGTCCAAGGATAC
GCCTTCGGTTCTTGCGCTGACCCGCCAGAATCTGCCGCAGCTGCGCAATAGCGGTGACATGCTTTCGGCGCGCGGCGCCT
ACACGCTTCGTCATGCTGCGGCCGACCGCAAGGTCATTCTGATCGCCAGCGGTTCCGAAGTGGAACTGGCCGTGAAGGTC
GCCGAGCAGCTGGAATCGCAGAACATCGGCGCCGATGTCGTCTCGATGCCCTGCATGGAGCTGTTCGAAGCGCAGGATGA
AGCGTACAAGCACGAAGTGCTGCCGCACGATGCGTCTGTCCTGCGCGTTTCGATCGAGGCCGGCTCGACGCTGGGCTGGG
AGCGCTATACCGCTGCGAGCCGCAACGGCGGTCTCAACATCGGCATCGACCGGTTCGGCGCGTCCGCGCCGGCAAAGGAC
CTGTTCGCACGCTTCGGTTTCACCGCCGAATCCATCGTGCCCAAGATTCTTGATAAGCTAAGCGCCTAA

Protein sequence :
MTLAPNRLAPMANAIRALSMDAVQAANSGHPGMPMGMADVATVLFSKFLKFDPAAPKWADRDRFVLSAGHGSMLIYSLLH
LTGYASPTMDDIRNFRQLGSVCAGHPENFLIPGVECTTGPLGQGLAMAVGMAMAERQLNGTFGDDLVDHKTWVIAGDGCL
MEGINHEAIGLAGNLKLGRLKVLWDDNNITIDGDTSLSTSEDIPARFRATGWDVFSCDGHDFADIERALAEAAASDKPSL
VACKTVIGKGAPNKQGSHDVHGAALGPDEVAAAREFLGWTAAPFEIPAEILADWRSLGEAGAKARAEWEGRLAASADAAE
FNRRMAGDLPEGDEAAKTFAGWLDGDTTVATRKASENCLNVLAPVVPEMVGGSADLTGSNNTKAKCQEPFTPENYAGRYV
YYGIREFGMAAAMNGMALHGGVIPYGGTFLIFSDYCRNAIRLSALQQTRAIYVLTHDSIGLGEDGPTHQPIEQVMSLRLI
PNLYVFRPADVIETAECWNIALQSKDTPSVLALTRQNLPQLRNSGDMLSARGAYTLRHAAADRKVILIASGSEVELAVKV
AEQLESQNIGADVVSMPCMELFEAQDEAYKHEVLPHDASVLRVSIEAGSTLGWERYTAASRNGGLNIGIDRFGASAPAKD
LFARFGFTAESIVPKILDKLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 9e-152 53
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-149 53