Gene Information

Name : PP1Y_AT23333 (PP1Y_AT23333)
Accession : YP_004534970.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 2459632 - 2460828 bp
Length : 1197 bp
Strand : -
Note : KEGG: gdi:GDI2780

DNA sequence :
ATGACCGACGACAGAATGGCCCTTGTTGAGCTGATTGAGCAAGGGGCTGACAGCGATTTGGTGCGCGAGATGCTGGCTTT
TGCCGCCGAGCGCATGATGGATATGGAGATCGAGGCGAGAACCGGCGCACCCGCCGGCAGCCGCAGCCCGGTTCGGCTCA
ACCACCGCAATGGCTACCGCGAACGGGGCTGGGACACCCGCGCTGGCCGGATCGACCTGGCGATCCCGAAGCTGCGCAAG
GGCAGCTACTTTCCGAGCTTCCTGGAGCCGCGCCGTACCGCTGAGAAGGCCTTGGCGGCGGTGATTCAGGAAGCCTACGT
CCACGGCGTCTCGACGCGCTCGGTTGATGATCTGGTCAAGGCGATGGGCGCCAGTGGGGTGTCGAAGAGCCAGGTCAGCC
GCCTGGTTGCCGAGATCGACGAGCGGGTGAACGCCTTCCTGGCGCGGCCGATCGAGGGCGAGTGGCCCTACCTGTGGATC
GACGCCACCTACCTCAAGGTACGCGAAGGCGGGCGTATCGTGTCCACGGCGGCGATAATCGCTGTCGGGGTCAACACCGA
TGGCCGGCGCGAGGTGCTGGGCGTCGCCACCGGCCCCTCGGAGGCCGAGCCCTTCTGGAAGAGCTTCCTGCGTTCGCTGG
CGGATCGGGGGCTGCGCGGGGTGAAGCTGGTCATTGCCGACGACCACAAGGGCCTGCGCGCCGCCGCCAGCAAGGTGTTC
GCCGCGAGCCAGCAACGCTGCCGCGTACACTGGATGCGCAACGCGCTGGCCCATGCCGCACCGAAGCAGCGACCCGCCGT
CATCGCCATGATTAAGACCATCTTCGCGCAGGAGACCGCCGAAGCGGCTCACCAGCAGTGGGAACAGGTCGCCGAAGCCC
TGCGCGAAAAGTTCCCCAAGCTCGCCAACATGATGGATGCATCGCGCGAGGACGTGCTCGCCTACATGGCCTTCCCCAAG
GAGCACTGGGCGCAGATCGCGTCGACCAACCCACTGGAAAGAGTGAACAAGGAGATCAAGCGGAGAGCCGACGTCATCGG
CATCTTCCCGAATGACGCTGCCGTCATCCGCCTCGTCGGAGCCCTCATGCTGGAGCAGAATGACGAGTGGGCAGTATCGC
GTCGTTACATGACGCTGGAAACGCTCGGCTCGGTAAGCCATAATCCAATGGTCAGCCTGCCAGCATTGGCTGCCTGA

Protein sequence :
MTDDRMALVELIEQGADSDLVREMLAFAAERMMDMEIEARTGAPAGSRSPVRLNHRNGYRERGWDTRAGRIDLAIPKLRK
GSYFPSFLEPRRTAEKALAAVIQEAYVHGVSTRSVDDLVKAMGASGVSKSQVSRLVAEIDERVNAFLARPIEGEWPYLWI
DATYLKVREGGRIVSTAAIIAVGVNTDGRREVLGVATGPSEAEPFWKSFLRSLADRGLRGVKLVIADDHKGLRAAASKVF
AASQQRCRVHWMRNALAHAAPKQRPAVIAMIKTIFAQETAEAAHQQWEQVAEALREKFPKLANMMDASREDVLAYMAFPK
EHWAQIASTNPLERVNKEIKRRADVIGIFPNDAAVIRLVGALMLEQNDEWAVSRRYMTLETLGSVSHNPMVSLPALAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-24 YP_001800852.1 transposase for insertion sequence Not tested Not named Protein 3e-53 44