Gene Information

Name : PP1Y_AT16481 (PP1Y_AT16481)
Accession : YP_004534343.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Virulence
Product : prophage regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1738123 - 1738320 bp
Length : 198 bp
Strand : -
Note : assigned by KAAS to KEGG Orthology:K07733 prophage regulatory protein

DNA sequence : 
ATGAACGAACACGAAGACAGATTCCTCCGAATGGGGGACGTCACCAGGAAAACCGGACGCTCCCGCGCGGCAATCTACCG
AATGATTGCCGAAGGCACCTTCCCCCCTCAAATCCCCATAGGCGCAAGAGCAGTGGGTTGGCGGTTGTCGTCGGTGCTGG
AATGGATGGAGTCGCCCAAGGACTACCATGCGAAATAA

Protein sequence : 
MNEHEDRFLRMGDVTRKTGRSRAAIYRMIAEGTFPPQIPIGARAVGWRLSSVLEWMESPKDYHAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-08 51
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 46
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 46
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 7e-10 46
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 2e-06 45
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-08 44
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 4e-08 44
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 4e-08 44
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 3e-05 42
unnamed CAA21398.1 - Not tested HPI Protein 5e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP1Y_AT16481 YP_004534343.1 prophage regulatory protein VFG1118 Protein 3e-10 46
PP1Y_AT16481 YP_004534343.1 prophage regulatory protein VFG1141 Protein 1e-08 44