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Name : PP1Y_AT14494 (PP1Y_AT14494) Accession : YP_004534168.1 Strain : Novosphingobium sp. PP1Y Genome accession: NC_015580 Putative virulence/resistance : Unknown Product : phage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1539990 - 1541243 bp Length : 1254 bp Strand : + Note : KEGG: sal:Sala_0444 DNA sequence : ATGCCTCTCACGGAGACTCAGGCCCGAAATTCCAAGCCAAGTGATCGCGCCTACAAGCTGGCCGACGGGGAGGGCTTATT CCTGTTCGTCCAGCCGAACGGATCAAAGTTGTGGCGGATGAAGTACCGCTTCGCAGGCAAGGAGAAGTTGCTCTCGTTCG GCGCTTACCCAGACCTCGGGATAGCTGCAGCGCGTGCCAAGCGCACAGCCGCAAAGGCGTTGCTAGCCGAGGGCAAGGAT CCAACGAAATCCAAGGGGGAAGTGATCTCGCAGGAGAGTGCCACTTTCTTTGATGTCGCAAAGCGCTGGCATGAAAATCG AAAGAGCGCGTTGAATGCCGCGCACGCCGAACGTGTCTGGTCGCGCATGGAAAGGGACGTGTTTCCAGCCATCGGCGAGA AACTCGTGCATGAAATCACTGCGCCCGACGTCCTGGCAATGATACGCAAAATCGAAGCAAGAGGCGCGCTCGATATCAGC CGGCGTGCGAAGCAAGGGGTTGGGCAAGTCTTCCAGTTCGCAATCGCGTGTGGCCTGGCCTCGAATGATCCGACGACACA TCTGCGTGGGGCGCTAAAGCCGCGACCACGAGTGAAGCATATGAGCCGGCTGCCGCTCAGCGAATTGCCCGCATTCATCG AGAAGCTGCATGCCTACCAGGAAGATGGCGAACGACGGTCCTCAATCACCCGTGACGCAGTTCTCTTTGCGCTCCTGACT TGGGTTCGAACGAAGGAGCTCCGCTTCGCCGCCAAATCCGAGTTCGAAGACCTCGGCGGCAAATCACCTGTCTGGCGCAT ACCGGCCGAGCGAATGAAGATGGGACGAGAGCATTTGGTTCCCCTCTCGCAGCAGGCAACGCACATCGCGAAATCTATGA TAGCAGCAGCGCCTGGCGAGTTTCTCTTCCCGGGTAACGGCCCGAACAAGCCGCTTTCAGAGAACACAATGATCTACGCG CTCTATCGCCTCGGATACCACAGTCGCCAAACCGTACACGGCTTCCGGGGCTTGGCGAGCACCTGGGCCAATGAGCAGTT GGTCGAGTTCGGCAAGCCGCCCATGTGGATCAGGAAATACCATGAGGATTGGGTCGAACTACAGCTCGCGCATTCGGAGA AAAACGACGTGCGTGGAGCTTACAATGCCGCTGAATATCTGGCTCCCCGGCGCCGGATGATGCAGGACTGGGCTGACTAT CTGAGCGGCGGGAAGGTGATCGACATCAAGAAGGCAGGGAAGCGCGCAGCCTGA Protein sequence : MPLTETQARNSKPSDRAYKLADGEGLFLFVQPNGSKLWRMKYRFAGKEKLLSFGAYPDLGIAAARAKRTAAKALLAEGKD PTKSKGEVISQESATFFDVAKRWHENRKSALNAAHAERVWSRMERDVFPAIGEKLVHEITAPDVLAMIRKIEARGALDIS RRAKQGVGQVFQFAIACGLASNDPTTHLRGALKPRPRVKHMSRLPLSELPAFIEKLHAYQEDGERRSSITRDAVLFALLT WVRTKELRFAAKSEFEDLGGKSPVWRIPAERMKMGREHLVPLSQQATHIAKSMIAAAPGEFLFPGNGPNKPLSENTMIYA LYRLGYHSRQTVHGFRGLASTWANEQLVEFGKPPMWIRKYHEDWVELQLAHSEKNDVRGAYNAAEYLAPRRRMMQDWADY LSGGKVIDIKKAGKRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-59 | 42 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 1e-60 | 42 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-60 | 42 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 6e-60 | 42 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 4e-60 | 42 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 4e-60 | 42 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 6e-60 | 42 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 2e-58 | 41 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 3e-58 | 41 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 3e-58 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP1Y_AT14494 | YP_004534168.1 | phage integrase | VFG0783 | Protein | 2e-60 | 42 |
| PP1Y_AT14494 | YP_004534168.1 | phage integrase | VFG0598 | Protein | 1e-58 | 41 |
