Gene Information

Name : PP1Y_AT12150 (PP1Y_AT12150)
Accession : YP_004533953.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : ATP-dependent HslUV protease ATP-binding subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 1298767 - 1300068 bp
Length : 1302 bp
Strand : +
Note : assigned by KAAS to KEGG Orthology:K03667 ATP-dependent HslUV protease ATP-binding subunit HslU

DNA sequence :
ATGAAAGACAACCTCACGCCCAAGGCCATCGTTCGCGCCCTCGATGAACACATCATCGGTCAGAAGGAAGCGAAGAAGGC
CGTCGCCGTCGCCCTGCGCAACCGCTGGCGGCGCCAGCGCCTCCCCGTCGACCTGCGCGACGAAGTGACGCCCAAGAACA
TCCTGATGATCGGCCCCACCGGCTGCGGCAAGACCGAGATCAGCCGCCGCCTCGCCAAGCTGGCGGAAGCGCCTTTCGTG
AAGGTCGAGGCGACCAAGTTCACTGAAGTCGGTTACGTCGGCCGCGACGTCGAGCAGATCGCGCGCGATCTCGTCGAGGA
AGCGATCCGCCTGGAGAAGGATCGTCGTCGCGAGTCCGTTCGCGAGGCGGCATCGAAGGCGGCGATGGATCGCCTGCTCA
ATGCGCTTGTGGGCGAGGGAGCCTCCGAGGCGACCCGCGCCGCGTTCCACCAGCGCATCACCGAAAACGCGATGAACGAA
ACCGAAGTCGAGATCGAGGTGGAAGACAGCCCGTCTGCCCCGATGGAGATTCCGGGCATGGGCGGATCGGTCGGGATGAT
CAACCTGTCCGACATCATGGGCAAGGCATTCGGCCAGAACCAGCTCAAGCGGCGGCGCATGAAGGTGCCCGAAGCCTGGG
ACAAGCTGGTCGACGAAGAATCCGAAAAGCGCATGGACCAGGACGACGTGGCCCGCACCGCGCTTGCCAATGCGGAGACC
AACGGCATCGTCTTCATCGATGAGATCGACAAGATCGCCGTTTCCGACGTGCGCGGCGGCTCGGTCTCGCGCGAGGGCGT
GCAGCGCGACCTGCTGCCGCTGATCGAGGGCACGACCGTTGCTACCAAGTACGGTCCGATGAAGACCGACCACGTCCTGT
TCATCGCCTCTGGCGCGTTCCACGTTGCCAAGCCGAGCGACATGCTGCCCGAACTGCAGGGCCGCCTGCCGATCCGCGTC
GAGCTGAAGGCGCTGACCGAGGAGGACTTCGTGCGCATTCTGTCGGAGACGCGCGCCAACCTTGTCGAACAGTACAGCGC
CTTGCTCGGTACCGAGGACGTCAGGGTCCACGTGACGGCCGATGCGGTACAGGAAGTGGCGAAGATCGCTGCGCAGGTGA
ACGAGAGCGTCGAGAACATCGGCGCCCGCCGTCTGCAGACGGTGATGGAGAAGCTGCTCGAGGAGCTGAGCTTCGAGGCC
GAGGACCGCACCGGCGAAACGGTGACCATCGACGAGGCCTACGTTCGCGACAAGCTGGAAGGCCTTGCGGGCAACGCGGA
CTTGTCGAAGTATATTCTCTGA

Protein sequence :
MKDNLTPKAIVRALDEHIIGQKEAKKAVAVALRNRWRRQRLPVDLRDEVTPKNILMIGPTGCGKTEISRRLAKLAEAPFV
KVEATKFTEVGYVGRDVEQIARDLVEEAIRLEKDRRRESVREAASKAAMDRLLNALVGEGASEATRAAFHQRITENAMNE
TEVEIEVEDSPSAPMEIPGMGGSVGMINLSDIMGKAFGQNQLKRRRMKVPEAWDKLVDEESEKRMDQDDVARTALANAET
NGIVFIDEIDKIAVSDVRGGSVSREGVQRDLLPLIEGTTVATKYGPMKTDHVLFIASGAFHVAKPSDMLPELQGRLPIRV
ELKALTEEDFVRILSETRANLVEQYSALLGTEDVRVHVTADAVQEVAKIAAQVNESVENIGARRLQTVMEKLLEELSFEA
EDRTGETVTIDEAYVRDKLEGLAGNADLSKYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 5e-98 48