Gene Information

Name : PP1Y_Lpl773 (PP1Y_Lpl773)
Accession : YP_004532667.1
Strain :
Genome accession: NC_015579
Putative virulence/resistance : Virulence
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 67371 - 68558 bp
Length : 1188 bp
Strand : +
Note : KEGG: glo:Glov_1533

DNA sequence :
ATGACCAAGCTGAACACTCTTGCCCGGCTGAGCGCCGCATTGCTCGTGGCTTCGGCCTTGTCTGGATGCGCGGTTTTGCC
GAGCTCCGGTCCATCGACCGGGCAAATTGCCCGTGCTGCAAAGGCGCAATCTGCAATCGAGGCCGGGATTGCCATAATCG
ACGTCAACGACGCAGTCGCACGTGAGATCGTTACCGCAAATCGCCAGGTGCCCTTCTCGGAAAGTCTCGGCGAGGCGCCG
CCTATAGGATCGGTGATCGGCAAAGGCGACGTGCTGGATATCGCAATCTGGGAAGCGCCTCCTGCCGCACTTTTCGGGGT
TGCCGGAGGAGTAACGCAGCTGACAGCCTCGGGTGCGACTGCCAGGGGAACCTCCTTGCCCGAGCAGATGGTCGATAGCG
ATGGCCTGATTACCGTGCCATTCGTCGGTCGCATCCAGGCCGCCGGACGCACGCCGCAGGAAATCGGGCGTGATATCAAT
AGACACCTCATCGGCAAGGCGCATCAGCCCCAGACGATCGTGCGCCTGGTGCGCAACGCGGCGGCGAACGTGACTGTCGT
TGGCGATGTCGCCACCAGCGCGCGGGTGCCGCTGACCGCACGGGGCGAGCGTGTGCTCGACGTTCTGGCCACTGCTGGCG
GCGTAAAGCAGCCGGTAGGCAAGATGGTGATCCAGATCACCCGCGGCGCCAGCGTATCGGCGTTGCCGCTGGAGACGGTG
ATCCGCGATCCGCGCCAGAACGTGCGCCTGCAGCCCGATGACGTCATGACCTTGCTGTTCCAGCCTTACAGCTTCACTGC
GCTTGGCGCGGTGGGTAGGAACGGAGAACTGCCATTCGAGGCTACCGGTTTGACATTGGCGCAGGCGCTTGGACGCATTT
CCGGCCTAGATGACGCCCGCGCCAATGCGAAGGGTGCATTCATCTTCCGCTTCGAGCGCCCCGAGGCTCTGCCGCAAAAC
CTGCGGCAGCTGGGCAGGCCAACGCCAGACGGCAGAATTCCGGTTATCTATCGCATCAACCTAAAGGATCCGGCGACGCT
CTTCGTGGCGCAGAGCTTCCCTATCCAAGACAAGGACGTACTTTACGTTTCCAACGCCCCGTTGGCTGATTTCCAGAAGT
TCCTTGGTGCGGTCTTCTCCACGATCCTGCCGGCGGCGACCACCGCAGCGGTGATTTCGCAGCAGTAG

Protein sequence :
MTKLNTLARLSAALLVASALSGCAVLPSSGPSTGQIARAAKAQSAIEAGIAIIDVNDAVAREIVTANRQVPFSESLGEAP
PIGSVIGKGDVLDIAIWEAPPAALFGVAGGVTQLTASGATARGTSLPEQMVDSDGLITVPFVGRIQAAGRTPQEIGRDIN
RHLIGKAHQPQTIVRLVRNAAANVTVVGDVATSARVPLTARGERVLDVLATAGGVKQPVGKMVIQITRGASVSALPLETV
IRDPRQNVRLQPDDVMTLLFQPYSFTALGAVGRNGELPFEATGLTLAQALGRISGLDDARANAKGAFIFRFERPEALPQN
LRQLGRPTPDGRIPVIYRINLKDPATLFVAQSFPIQDKDVLYVSNAPLADFQKFLGAVFSTILPAATTAAVISQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 6e-69 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP1Y_Lpl773 YP_004532667.1 polysaccharide export protein VFG2566 Protein 6e-96 53
PP1Y_Lpl773 YP_004532667.1 polysaccharide export protein VFG0255 Protein 3e-69 43
PP1Y_Lpl773 YP_004532667.1 polysaccharide export protein VFG0699 Protein 3e-71 42
PP1Y_Lpl773 YP_004532667.1 polysaccharide export protein VFG0687 Protein 3e-71 42