|
Name : PP1Y_Lpl1338 (PP1Y_Lpl1338) Accession : YP_004532721.1 Strain : Genome accession: NC_015579 Putative virulence/resistance : Unknown Product : putative integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 122495 - 124021 bp Length : 1527 bp Strand : + Note : KEGG: gdi:GDI2705 DNA sequence : ATGGCGTTACTGAGTGTAATCCGACGCTGGCATTTCCGGCAAAACATCCCGATCCGGGAGATTGAGCGGCGCACGGGCTT GTCGCGCAACACGATCCGCAAGTACCTGCGCGCGGATACTGTGGAGCCGAAGTTCAAGGTCCCAGAGCGGCCGAGCAAGC TGGACCCGTTTGCCGAGAAGCTGTCGGCCTGGCTGCGGATCGAAGCTGGCAAGTCACGCAAGCAGCGGCGCACAGCTAAG CAGATGCACGCCGATCTCGTGGCTTTGGGATACGAGGGTTCCTACAACCGCGTGGCAGCCTTCGCGCGGGCCTGGAAGGC CGACCGGCAGCGCGATGCCCAGACCAGTGGTCGCGGGACTTTCGTGCCGCTGATCTTCCGACCCGGCGAAGCCTTCCAGT TTGACTGGAGCGAGGACTGGGCCATGATCGGCGGCAAGCAGACCAAGCTGCAGGCCGCACACACGAAGCTGTCGCACAGC AGGGCTTTCGTCGTCAGGGCCTATCCACTGCAGACCCACGAGATGCTGTTCGATGCCATGACCCAGGCCTTCCGGGTTCT GGGCGGCGTGCCGCAACGAGGAATCTTCGACAATATGAAGACCGCGGTCGACAAGATCGGCACCGGCAAAGCGCGGCAGG TCAACGCCCGTTTTGCCGCCATGGCGAGCCACTATCTGTTCGAGCCGGAGTTCTGCAACCCGGCCGCAGGATGGGAGAAG GGTCAGGTCGAGAAGAACGTCCAGGATGCACGGCGGCGATTGTGGCAGGCAATGCCAGCCTTCCCGGACATCGATGCGCT CAATGCCTGGCTCGAGGAGCAATGCATCGCGCAGTGGGGAGAGATTCCGCATGGCGTGCTGCCCGGCACCATCGCCGACG TGCATGCCGCGGAGATCGCGAGCCTGATGCCGCTGGGGCGGCCCTTCGACGGCTTCGTTGAACACACCAAGCGAGTATCG CCGACATGCCTGATCTCCTTCGAGCGCAACCGCTACAGCGTCCCCGCGTCCTTCGCCAACCGGCCGGTAAGTCTGCGGGT CTATCCCGAGCGGATCGTCATTGCCGCCGAGGGACAGATCCTGTGCGAGCATGGGCGGATCATCGAACGATCCCATGATC AGCCGGGACGGACGATCTATGACTGGCGGCACTATCTCGCGGTGATCCAGCGCAAACCGGGAGCCCTGCGCAATGGCGCG CCCTTCACCGAGATGCCGGAGGCGTTCCGGCAGCTGCAGAGCCAACTTCTGAAGCGCCCCGGCGGCGATAGGGAGATGGT GGAGATCCTCTCGTTGGTCCTGCACCATGACGAACAGGCCGTGCTGTGTGCCGTCGAACTGGCTCTCGAGGCCGGCGTCG TGACCAAGACCCATATCCTCAATATCCTGCACCGCCTGGTCGACGGCAAGGACGGCACTCCGCCCAGGATCGATGCCCCG CAGGCCCTGATCCTCCGCCGCGAACCCAAGGCCAACGTCGCACGTTATGATACCCTGCGGGACAAGGATCTGCGCCATGC GTCATGA Protein sequence : MALLSVIRRWHFRQNIPIREIERRTGLSRNTIRKYLRADTVEPKFKVPERPSKLDPFAEKLSAWLRIEAGKSRKQRRTAK QMHADLVALGYEGSYNRVAAFARAWKADRQRDAQTSGRGTFVPLIFRPGEAFQFDWSEDWAMIGGKQTKLQAAHTKLSHS RAFVVRAYPLQTHEMLFDAMTQAFRVLGGVPQRGIFDNMKTAVDKIGTGKARQVNARFAAMASHYLFEPEFCNPAAGWEK GQVEKNVQDARRRLWQAMPAFPDIDALNAWLEEQCIAQWGEIPHGVLPGTIADVHAAEIASLMPLGRPFDGFVEHTKRVS PTCLISFERNRYSVPASFANRPVSLRVYPERIVIAAEGQILCEHGRIIERSHDQPGRTIYDWRHYLAVIQRKPGALRNGA PFTEMPEAFRQLQSQLLKRPGGDREMVEILSLVLHHDEQAVLCAVELALEAGVVTKTHILNILHRLVDGKDGTPPRIDAP QALILRREPKANVARYDTLRDKDLRHAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 1e-146 | 60 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 1e-107 | 48 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 5e-86 | 43 |
