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Name : rplS (TREPR_3157) Accession : YP_004529975.1 Strain : Treponema primitia ZAS-2 Genome accession: NC_015578 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1009061 - 1009480 bp Length : 420 bp Strand : - Note : identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024 DNA sequence : ATGAACGAAATACGGGCGATTGAAGCCTCCCAGATGAAGGAAACACTGGACGATTTCAAAGTAGGGGATACCGTGAAGGT CCACTTTAAGATCGTTGAAGGAAAAACCGAACGGATCCAGGTCTACGAAGGCCTGGTCATTGCCATGAAGAATTCCCGGA TAGGAAAGACCTTTACGGTCAGGAAAAATTCCTACGGCGTCGGGGTTGAACGGATATTTCCCATTCATTCACCCCGGATC GCCCGGGTAGAACTGATGCGCCCCGGCCGGGTGCGTCGGGCCAAACTCTACTATATCCGTGACAAGATCGGTAAGGCCGC CAAAATCCGGGAACTTATCATCAGGAAGAAGCCCCAGACAGCAGTTGCCGCCGCCCCTGCGGAAGCGTCCGCTGAAGCTC CGGCAAGCGCCCAGAGCTAG Protein sequence : MNEIRAIEASQMKETLDDFKVGDTVKVHFKIVEGKTERIQVYEGLVIAMKNSRIGKTFTVRKNSYGVGVERIFPIHSPRI ARVELMRPGRVRRAKLYYIRDKIGKAAKIRELIIRKKPQTAVAAAPAEASAEAPASAQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-26 | 56 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-23 | 50 |
