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Name : TREPR_0344 (TREPR_0344) Accession : YP_004532536.1 Strain : Treponema primitia ZAS-2 Genome accession: NC_015578 Putative virulence/resistance : Virulence Product : VI polysaccharide biosynthesis protein VipB/tviC Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 3999489 - 4000460 bp Length : 972 bp Strand : - Note : identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993 DNA sequence : GTGAAAATATTGATTACAGGCGGAGCGGGTTTTATTGGATCTAACCTTTGTGAATATTTTTTGAAAAATGCTCATAATAT TGTATGTTTTGATAATTTTTCAACCGGAAAAGTCGAAAATATTACTAATTTTTTACTACAATACCCCAATACATTTGAAT TGCAAGTTGGAGATATCCGTAATATTTCTGATTGTAGGAAAGCGGTTGAAGGAGTTGACGTTGTGTTACATGAAGCGGCA TTAGGATCAGTTCCACGATCTATAAAAGATCCTATAACAACTAATGAAGTTAATATTTCAGGTTTTCTTAATATGCTTGT GTCTTCATGTGATGCAAAAATAAAACGTTTTATATATGCTGCAAGTTCTTCTACCTATGGAAACAGCGAAATATTGCCAA AAGAAGAGGATGTGATAGGAAAGCCTCTTTCCCCTTATGCCGTAACTAAATACGTAAATGAACTTTATGCAGATGTTTTT TCTAAGACCTATGGTGTTGAATGTATAGGTTTACGGTATTTTAATGTATTTGGCCGAAGACAAGATCCTTTTGGCGCCTA TGCAGCGGTTATTCCTCTATTCATAAAAAATTTTATAAATCACGAAAGTCCTGTTATTAATGGAGATGGACAATATAGCC GTGATTTTACTTTTATTGATAATGTGATTCAGATGAATATGTTAGCAATAAATACTGATAACCAGAAAGCCCTTAATCAA ATTTATAATACTGCATGCGGAGAGAAAACGACATTAAATCAATTAGTTGTGTATTTGAAGGAATTACTATGTCAATATGA TTCAGAGATAGAAAAAATTGAAATTTTACATGGAAAAGAGCGGGCAGGAGATATTCCACATTCATTGGCTAGCATCGAGA AGGCAAAAAAGTTACTCGGATATATTCCAAAGCAAAATATATATGATGGCCTCAAAGAATCTATAGACTGGTATTGGAAA AACTTAAAGTAG Protein sequence : MKILITGGAGFIGSNLCEYFLKNAHNIVCFDNFSTGKVENITNFLLQYPNTFELQVGDIRNISDCRKAVEGVDVVLHEAA LGSVPRSIKDPITTNEVNISGFLNMLVSSCDAKIKRFIYAASSSTYGNSEILPKEEDVIGKPLSPYAVTKYVNELYADVF SKTYGVECIGLRYFNVFGRRQDPFGAYAAVIPLFIKNFINHESPVINGDGQYSRDFTFIDNVIQMNMLAINTDNQKALNQ IYNTACGEKTTLNQLVVYLKELLCQYDSEIEKIEILHGKERAGDIPHSLASIEKAKKLLGYIPKQNIYDGLKESIDWYWK NLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 2e-67 | 51 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 2e-67 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TREPR_0344 | YP_004532536.1 | VI polysaccharide biosynthesis protein VipB/tviC | VFG0430 | Protein | 1e-67 | 51 |
