Gene Information

Name : TREPR_0630 (TREPR_0630)
Accession : YP_004532274.1
Strain : Treponema primitia ZAS-2
Genome accession: NC_015578
Putative virulence/resistance : Unknown
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 3694813 - 3696045 bp
Length : 1233 bp
Strand : -
Note : identified by match to protein family HMM PF01053

DNA sequence :
ATGCCCGATAAACATGAAGGTATAAATCAACATTCCGACAAGGATGCCGCCGACTGCGGCAAGGTTCCCTGTACGGCCCC
TTACGGTAAACTGTCGATTAAAACCGTTACCGTGCATGGGGCTACCCTGTTTGAGCCCCATACCGGGGCGGTCAGCACGC
CCATATACCAGAGTTCAACTTTCAGGCACCCTGGGCTCTATGAGTCCACGGGATTTGACTATTCCCGAGCCGTCAACCCC
ACTAGGTCGGAACTGGAAAAGACTATTGCCCTCCTGGAACATGGGAAATACGGCCTTGCCTTTGCCAGCGGTATGGGGGC
TATCTCATCGGTAATAAAACTGTTCAAGCCCGGGGATCACATTATTGTGTCGGAGGATCTCTACGGCGGCACCTACCGGC
TCTTCCATGAATACTACGCCAAGTACGGCTTTAGCTTTTCCTGGATCGATACCAGTAACTTTGCCCTGGTGGAAGGGGCG
ATGAAGAGCAATACCCGGGGGATTTTTATTGAAACCCCCTCCAATCCCATGATGAAGGTTAGTGATATCCGCCGCTCTGG
GGATCTTATCCATAAACAGCAGGGCATTCTTATCGTGGACAATACTTTCCTTTCCCCTTATTACCAAACCCCCCTGGACC
TGGGTGCGGATATTGTGGTCCACAGCGGGACAAAGTACCTGGCAGGGCACAACGATACCCTGGCGGGACTTCTTGTCCAC
TCCAGGGAGGATCTGGCCGAGCCCCTGGCCAATGCCCATAAAAGCGAAGGCGCCACCCTCGCGCCTTTTGACGCATGGCT
CGTCCTGCGGGGGATAAAAACCCTATCGATAAGGATGGAGCAGCATGAAAAAAACGCCTACCGTATCGCTGCCTGGCTGC
GAGAACACAAGCGGGTAGAAAAAGTGTTTTATACCGGGTTTGAGGATCACCCCCAGTACAGTTTGAGTAAGTCCCAGTCC
CGGGGCTTCGGAGGTATGATATCTTTTTATCTGAAGAACAGGGATGATGTGCCGATTCTTCTTAAAAACATTTCACTCAT
TCTTTTTGCAGAAAGCCTTGGGGGGGTAGAGACACTGCTGACCTATCCACTGGTGCAGACCCACGGGGCTATCCCGGAAG
AAATGCGGCTTTCCGCCGGAGTGAATGATCGGCTCATGCGCCTGTCCGTAGGTATTGAGGACGCCGGGGATCTTATTACG
GATCTGGACGGCGCTTTTTCAAAATGTATATAG

Protein sequence :
MPDKHEGINQHSDKDAADCGKVPCTAPYGKLSIKTVTVHGATLFEPHTGAVSTPIYQSSTFRHPGLYESTGFDYSRAVNP
TRSELEKTIALLEHGKYGLAFASGMGAISSVIKLFKPGDHIIVSEDLYGGTYRLFHEYYAKYGFSFSWIDTSNFALVEGA
MKSNTRGIFIETPSNPMMKVSDIRRSGDLIHKQQGILIVDNTFLSPYYQTPLDLGADIVVHSGTKYLAGHNDTLAGLLVH
SREDLAEPLANAHKSEGATLAPFDAWLVLRGIKTLSIRMEQHEKNAYRIAAWLREHKRVEKVFYTGFEDHPQYSLSKSQS
RGFGGMISFYLKNRDDVPILLKNISLILFAESLGGVETLLTYPLVQTHGAIPEEMRLSAGVNDRLMRLSVGIEDAGDLIT
DLDGAFSKCI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-79 45
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-81 45
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-66 42