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Name : clpB (TREPR_0638) Accession : YP_004532266.1 Strain : Treponema primitia ZAS-2 Genome accession: NC_015578 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3685111 - 3687729 bp Length : 2619 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGGATTTCGAAAAATTAACCGTAAAAGCCCAGGAAGCCATTAACGAAGCTTCCGGAATCGCCCAAAAAAACGACCATTC CCAGATTGAAACCGAACACCTGCTTCTGGCTCTGCTCAGCCAGGAAGATGGCATTGTTTTGCCCATTGTCAAGCAAATCG GGGCCAATACGGAGCAGCTTATCGCCGACATACAGGCCCTGGTAGCCGCTAGCCCCAAGATTTATGGCGAAGCTGCCCAG GTATACCTCTCGTCAGCGGCTTCCAAGGTTTTGGCAAAGGCCGAAACCGAGGCCTCTTCCTTAAAAGACGAATACATTTC CGCCGAACACCTGCTTCTTGCCATAGTCGCCGGGGAAGGGAAGGCTGCGGATGTCCTGAAAAAGGCAGGGGTCACCCATC AGTCAATCCTTGCCGCATTGAAGCAGGTCCGGGGGAACGCTCGGGTAACTGACCAGAACCCCGAGGGCAAGTACCAGGTT CTGGACAAGTACTGCCGGGACCTTACCGCCCTGGCCCGGCAGGAAAAGCTCGACCCGGTCATAGGCCGGGACGAGGAAAT ACGCCGGGTGATGCAGGTCCTGTCCCGGCGCACCAAGAACAACCCGGTCCTCATCGGCGAACCCGGTGTGGGGAAGACCG CTATCGCCGAAGGCTTGGCCCGGCGCATCGTGGCCGGGGATGTGCCCGAAGGGCTCAAGGGGAAAAAACTCCTGTCCCTG GATTTAGGCGCCCTGGTAGCGGGGGCCAAGTTTCGGGGGGAATTCGAGGAGCGGCTCAAGGCGGTGATCCACGAGGTCCA AGCCGCAGACGGGAACATAATACTGTTTATCGACGAACTCCACACCCTGGTGGGCGCGGGGGCCGCAGAAGGCGCCACCG ACGCCTCCAATCTGCTCAAGCCTGCTCTGGCCCGGGGGGAACTCCGCTGCATAGGCGCCACCACCCTGGACGAGTACCGC AAACATATTGAAAAAGACGCCGCCCTGGAACGGCGCTTCCAGCAGGTCTACACCGCTGAGCCTTCCGTGGAGGACACGAT AGCGATACTGCGGGGCTTGCAGGAACGCTACGAGGTACACCACGGGGTGCGTATAAAAGACGAAGCCCTGGTGGCCGCAG CAACACTGTCGGACCGATACATCACCAGCCGCTTCCTTCCGGATAAGGCCATCGACCTGGTGGACGAAGCGGCCAGCCGT CTCAAGATGGAACTGGACAGCCGGCCCACGGAGCTGGACAAACTGGAACGGAAACTGTTGCAGCTTTCCATTGAACGGCA GGCCCTGACCCGCGAAGAGGACGCTGCCTCCAAAGACCGGCTAGGCAAACTGGAAAAAGAAATCGCTGAGCTTACCGCTG AACGGGATGCTATGAAAGCCCGGTGGGACAGCGAAAAACAGGATATCCAAAAGATAAGGGAAATCAAACAACGCATAGAA GAACTGCGCATAGAAGAGACCCGTTACGAACGGGAGGGGAACCTCACAAAAGCTGCGGAAGTTAAGCACGGCCGCATCCC GGAGGCACAGAAAGAGCTTGCCCGGCTCACCGGCTTGATGGAAGAGAAACGGGAAAGCGGCAGAGGCGTGCCGGCCCTGC TCCGGGAAGAGGTGAGCGAGGAAGATATTGCCCAGGTGGTATCCGCGTGGACTGGCATCCCGGTTTCAAAGATGCTAAGC GGGGAACTCCAGAAGTACCTGGACTTGGAAAAGGTCCTGGAACAGCGGGTGGTAGGCCAGGGCGCGGCGGTGTCCGCGGT GGCCGATGCCATCCGGCGGAACAAGGCCGGTCTTTCCGATGCCAGCCGTCCCCTGGGCTCCTTCCTGTTCCTCGGCCCCA CCGGGGTGGGCAAAACTGAACTTGCAAAGACCCTGGCAGACTTCCTCTTTAACGACGAAAAGGCCCTGACCCGGATCGAC ATGAGCGAATACGGGGAAAAGCATTCGGTAAGCCGCCTCATCGGTGCGCCTCCGGGCTATGTGGGTTACGAGCAGGGGGG CCAGCTCACCGAAGCGGTGCGCCGCCGCCCCTACAGCGTGATCCTCTTTGACGAAATCGAGAAGGCCCACCCGGAAGTGT TCAACGTCTTTCTCCAGATCCTCGACGATGGCCGCCTCACCGACGGCCAGGGCCGGGTGGTGGATTTCAAAAACGTGATC ATCATCATGACAAGCAACCTTGGCTCAGACCTGATCCTTGGAACCAAAAACCCCGATGACATTAAGGATGGGCTGATGGA ACTCCTCAAGCAAAGCTTCCGCCCGGAATTCTTAAACCGCATCGATGAGACGGTGATCTTCAACCGCCTGGGCCGGGATG AGATCAGTAAAATTGTGGACATCCAGCTCAAGCGCCTTTCTGCCCGGCTTCTGGACCGGAAGATCACCCTCACGGTCACC GATGGTGCCAGGCAGCTTTTGGCGGAACGGGGTTACGATCCCCTCTTCGGCGCCCGGCCCCTAAAACGGACCATACAGGC GGACCTGGAAAACCCCCTGGCCAAGGGGATCATTGCCGGGAAGATAAAGGACGGGGATGCGGTCACTGCGGACCGAGGTC CGGCGGACAAAGCGCCCGGTGGAGACGGTCTTATTTTTAAGAAAGGTCCGGCCGTATAG Protein sequence : MDFEKLTVKAQEAINEASGIAQKNDHSQIETEHLLLALLSQEDGIVLPIVKQIGANTEQLIADIQALVAASPKIYGEAAQ VYLSSAASKVLAKAETEASSLKDEYISAEHLLLAIVAGEGKAADVLKKAGVTHQSILAALKQVRGNARVTDQNPEGKYQV LDKYCRDLTALARQEKLDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVAGDVPEGLKGKKLLSL DLGALVAGAKFRGEFEERLKAVIHEVQAADGNIILFIDELHTLVGAGAAEGATDASNLLKPALARGELRCIGATTLDEYR KHIEKDAALERRFQQVYTAEPSVEDTIAILRGLQERYEVHHGVRIKDEALVAAATLSDRYITSRFLPDKAIDLVDEAASR LKMELDSRPTELDKLERKLLQLSIERQALTREEDAASKDRLGKLEKEIAELTAERDAMKARWDSEKQDIQKIREIKQRIE ELRIEETRYEREGNLTKAAEVKHGRIPEAQKELARLTGLMEEKRESGRGVPALLREEVSEEDIAQVVSAWTGIPVSKMLS GELQKYLDLEKVLEQRVVGQGAAVSAVADAIRRNKAGLSDASRPLGSFLFLGPTGVGKTELAKTLADFLFNDEKALTRID MSEYGEKHSVSRLIGAPPGYVGYEQGGQLTEAVRRRPYSVILFDEIEKAHPEVFNVFLQILDDGRLTDGQGRVVDFKNVI IIMTSNLGSDLILGTKNPDDIKDGLMELLKQSFRPEFLNRIDETVIFNRLGRDEISKIVDIQLKRLSARLLDRKITLTVT DGARQLLAERGYDPLFGARPLKRTIQADLENPLAKGIIAGKIKDGDAVTADRGPADKAPGGDGLIFKKGPAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-100 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 9e-103 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 7e-103 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004532266.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 4e-112 | 43 |
| clpB | YP_004532266.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 2e-107 | 42 |
