|
Name : TREPR_0684 (TREPR_0684) Accession : YP_004532223.1 Strain : Treponema primitia ZAS-2 Genome accession: NC_015578 Putative virulence/resistance : Virulence Product : nitrogen assimilation regulatory protein NtrX Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 3631064 - 3632449 bp Length : 1386 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954 DNA sequence : ATGACAAAAATACTAATCATTGATGATGAACCGGGGATACGGAAAACCCTTGCCTCCATATTGGAAGATGAACACTACCT TGTGCATACTTCGGAGGACGCTATCATGGGGATGGACTTTCTGGAACAGGAACCGGTGAACCTGATTTTTCTTGATGTGC TGCTGCCCCGCCTGGGGGGCCTTGAAGCCCTGGACCGGATCCATAAAAAATGGCCCGGGATAGAGGTGGTGATCATTTCC GGGCACGCCAATGTGGACATGGCAGTCCGGGCAGTAAAACTAGGGGCCTTTGATTTTCTGGAAAAGCCCCTGTCCCTGGA CAAGGTGCTTACGGTTTGCCGTAACGCCCTGGCACTGCAAAAACTCAGAGAAGAAAATACGGACCTGCGAAAAAATATCC TGAACAGCGATGATATCATCGGCGCCAGTGAACCCATAGCCCGGGTTCGGGAACTGATCAAACAGGCCGCTATCAGCGAC GCCCGGATCCTGATCACCGGGGAAAACGGCACGGGCAAGGAACTGGTGGCCCGGGCGGTGCACCGGCTTTCCTCCCGGGC GGGCAAGGCTTTTGTGGAAGTGAACTGCGCGGCCATTCCGGAAACCCTCATCGAAAGCGAACTCTTCGGCCATGAAAAGG GGGCCTTTACCGATGCGGTCGCAAGCCGCAAGGGCCGCTTCGAACTGGCCTACCAGGGGACCCTTTTCCTGGACGAGATT GGGGATATGAGCCTGGCAGCCCAGGCCAAGGTCCTGCGGGTCATCCAGGAACAGAAACTTGAGCGGGTGGGGGGTGAAAA AACCATTGATACGGATGTGCGTATCCTGGCGGCCACCAATAAAAACCTGGAGGAAGAATGCGCGCGGGGCCGCTTCCGGC AGGACCTCTTCTTCCGGCTCAACGTGATCCCCATCAATATGCCCCCACTCCGGGAGCGGCCCGGGGACATACTCCTGCTG CTCCGCCACTTTCTGGGAGAGCTGGGGGTGGAATGGCCGGAAATGGAAGACGGAGCCCGGGATATGCTTCTGGCCCACCC ATGGCCTGGGAATGTGCGGGAACTTAAAAACCTGGCGGAGCGAATTGCTGTACTCTGCAATGGGGAAAAAATCAAAACCG GGGTGCTCCAGGATATGCTCAAAAAAAACCCCGGGGCAGAAAAAAATCCGGAAAAATCCGGGGGGGACACTTTACAAAAC CAATTGCCACTGGATATATTTAAACTTGATTATACAGAAGCCAAAGAAGTATTTGAAAAGAACTATTTGGAGTACCAGCT TGCTCAAAACGGCGGCATCATTTCCCGAACCGCCGAGGCCATCGGTGTTTATCCAAGTAATCTCCATGCAAAAATACGAA AATACGGATTAAGGACAGAACGATGA Protein sequence : MTKILIIDDEPGIRKTLASILEDEHYLVHTSEDAIMGMDFLEQEPVNLIFLDVLLPRLGGLEALDRIHKKWPGIEVVIIS GHANVDMAVRAVKLGAFDFLEKPLSLDKVLTVCRNALALQKLREENTDLRKNILNSDDIIGASEPIARVRELIKQAAISD ARILITGENGTGKELVARAVHRLSSRAGKAFVEVNCAAIPETLIESELFGHEKGAFTDAVASRKGRFELAYQGTLFLDEI GDMSLAAQAKVLRVIQEQKLERVGGEKTIDTDVRILAATNKNLEEECARGRFRQDLFFRLNVIPINMPPLRERPGDILLL LRHFLGELGVEWPEMEDGARDMLLAHPWPGNVRELKNLAERIAVLCNGEKIKTGVLQDMLKKNPGAEKNPEKSGGDTLQN QLPLDIFKLDYTEAKEVFEKNYLEYQLAQNGGIISRTAEAIGVYPSNLHAKIRKYGLRTER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 6e-57 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 6e-57 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TREPR_0684 | YP_004532223.1 | nitrogen assimilation regulatory protein NtrX | BAC0467 | Protein | 3e-55 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TREPR_0684 | YP_004532223.1 | nitrogen assimilation regulatory protein NtrX | VFG0116 | Protein | 4e-59 | 44 |
| TREPR_0684 | YP_004532223.1 | nitrogen assimilation regulatory protein NtrX | VFG1214 | Protein | 4e-64 | 41 |
| TREPR_0684 | YP_004532223.1 | nitrogen assimilation regulatory protein NtrX | VFG1249 | Protein | 4e-60 | 41 |
