Gene Information

Name : argF (TREPR_1366)
Accession : YP_004531598.1
Strain : Treponema primitia ZAS-2
Genome accession: NC_015578
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 2934269 - 2935216 bp
Length : 948 bp
Strand : +
Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658

DNA sequence :
ATGGATAAAAATACATTAAAGGGACGATCCCTGCTCACCTGGCTTGATTATTCCGAAGAGGAAATTCGCTATTTTCTTGA
TTTGTCAAAGCAAGTCAAGGAAGAAAAAAAGCGGGGGGAACTTCATCAGCGTTTTACTGGGAAAACAATTGCCCTGCTTT
TTGAAAAGCGCTCTACCCGGACCCGCTGTGCCTTTGAAACATCCATAGGGGAGGAAGGGGGGCATCCGGTGTTCCTTTCC
ACTGCGGACATACAGCTGGGGGAAAAGGAATCCGTGGAAGATACCTCCCGTGTCCTGGGCCGTATGTTCAGCGCCATCCA
ATTCCGGGGCTTCAAACAGTCCACCGTGGAGACCCTGGCTAAATTTTCCGGGGTGCCGGTGTACAACGGGCTTACCGACA
ATTTTCACCCCACCCAAGTCCTGGCGGACATCATGACTATCGAAGAAAATTTTGGTTCCTCCAGGGGAAAGAAACTCTGC
TTTGTGGGGGACGGGAGAAACAATGTGGCCCGTTCCCTGATGGTGATTTGTGCAAAACTGGGGGTCCACTTTACCATTGT
CACCCCCCCTGCCCTCATGCCCGATCCGGCGCTGGTCAAAACCTGCGAAACCCTGGCCGCTGCCGCCGGTTCAAAAATAC
TGATCACCGCCGATACTGCGGCGGTCGAAGGGGCCCATGCCCTATACACCGATGTATGGGCATCCATGGGGGAAGAGGCG
GTAAAGGCGGAACGGGTTAAACAGCTCAGCCCCTTCCAGGTTAACCAGGACCTTATGGCTAAGACCGGCCTCAAGGAAAC
TATCTTCCTCCATTGCCTGCCGGCCATACGGGGCGAAGAGGTTACTGCCGCCGTCATTGACGGAAATCAAACCCGGGTTT
GGGATGAGGCGGAAAACCGCAAACACACTATCAAAGCAATAATGCTGGGGACCCTCGGCCTGGCCTGA

Protein sequence :
MDKNTLKGRSLLTWLDYSEEEIRYFLDLSKQVKEEKKRGELHQRFTGKTIALLFEKRSTRTRCAFETSIGEEGGHPVFLS
TADIQLGEKESVEDTSRVLGRMFSAIQFRGFKQSTVETLAKFSGVPVYNGLTDNFHPTQVLADIMTIEENFGSSRGKKLC
FVGDGRNNVARSLMVICAKLGVHFTIVTPPALMPDPALVKTCETLAAAAGSKILITADTAAVEGAHALYTDVWASMGEEA
VKAERVKQLSPFQVNQDLMAKTGLKETIFLHCLPAIRGEEVTAAVIDGNQTRVWDEAENRKHTIKAIMLGTLGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 8e-67 47
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-65 47
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-65 47
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-65 47
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-65 47
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-65 47
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-65 47