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Name : TREPR_1834 (TREPR_1834) Accession : YP_004531175.1 Strain : Treponema primitia ZAS-2 Genome accession: NC_015578 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/MecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2413474 - 2416089 bp Length : 2616 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : TTGTCAAAAGGTTTAACCCAGCGGGCCCATCGTATATTGACCATCGACGCTCAGGAAGAGGCGCGTCACTTTAATTCGGA TCAGCTCCTGCCGGAACATGTGGTAATTGCCCTGCTCAAAGAAGGGGCGGGTATAGGCTGCAAAGCCCTGATGTTCCTCA GAATCGATTTACAGGAATTCCGGCATACCCTAGAAAATGAAATTACCCGGATGAGCGGGCTTCTGGTGTACGGGGACGTT CCTCCTTCCAAACGAACCAGGGCCTTGCTGGAAAATGCCGCCGAAGAAGCCCGGACCATGGGCAATGATTATATTGGCAC GGAACACATCCTCTTTGCCGCCATGCGTGAACAGGATTCACCGGTGCAGCTGTACCTGAACCAGCGGGCGGTGGATACAG ATATGCTGCGGGTGGTGGTACAGACCACCTTTAGCCACGGCAGCGGACCGGAGGATGATTTTCTCCCCCCGGGCAAGATG TCCGGGGCGCCTGAAGGGTACCAGTCCCCCTTCCTCCACAGCCGGGGCTCCGGGGGCTTTCCGCCGAAACCCGGTGAGGA AGCCAGGCGTTCCCGGCCGGACCGGGTGAAACCGGTAAACTACCCTCCCCTCAGCGCCACCCCTACCCTGGATGAATACT CCCGGGACCTGACCGCTTTGGCAAAACTGGGCAAACTGGATCCGGTGATCGGTAGGCGGAAGGAAATCGACCGGTCGGTG CGTATCCTGGCCCGGCGGACCAAAAACAACCCGGTCCTGGTGGGTGAACCCGGGGTGGGAAAAACCGCCATCGTGGAAGG CCTGGCCCAGCTCTTTTCCGGGGAGGATATCCCGGAAGCTCTGGCGGGAAAACGGATCCTCTCCCTGGACCTGGGCTCCG TGGTTGCGGGAACCAAGTACCGGGGGGAATTTGAGGAACGGCTCAAAAAAATCATGAAGGAAATCGCTGCCGCCCGGAAT GTGATCCTCTTTATTGACGAGATCCATACGATTATCGGGGCCGGGGGCGCCGAGGGAACCATTGACGCCTCGAATATGCT CAAGCCCGCCCTTTCCCGGGGGGATATCCAGTGCATAGGCGCCACCACATTGGGGGAATACCGGAAGCACTTTGAAAAAG ATGCGGCCCTGGAACGGCGTTTCCAGGCGGTGCAGGTGAATGAACCGGACACCGATGAAACTCTAAAGATACTCAAGGGC ATTCAGAAAAAATACGAGGACCATCACCGGGTGACCTACACCCCCGAATCGGTGTCCGCCGCAGTGCGCCTGGCCCAACG CTACATCATAGGCCGGTTTATGCCCGATAAGGCAATCGACATCATGGACGAGGCTGGGGCCATGCGGAAACTGGAAGCGG GAAGCCATCCCCCGGAAGTTTCGGAAATCGAAACGGAAATACAGCAGCTTACCAACGAAAAAAGCGCCCTGGTTTCGGTC CAGGATTATGAACGGGCCGCAGGAATCCGGGACCGGGTACGGAGCCTCAGGCTGCGCCTGGAGTCCCTCAGGGATGCCTG GGAGCGGTCCTCCCGGGAAGAGCGGATGGTGGTGGACGAAGGGGATATGAGGCGGGTAGTTGCTGAAACCACCGGGATAC CCCTGACCAGGATGGAAGAGCAGGAGTCCAGGCGGCTCCTGCGTATCGAGGAGGAGCTTCACAAGGAAGTGGTGGGCCAG GACGAAGCGGTAAAGCGCATCGCCTCATCCATACGCCGTTCCCGGGCGGGGATTTCCTCACCCAAGCGGCCCATGGGATC CTTCATCTTCCTGGGCCCCACGGGGGTGGGCAAAACCCTCCTGGCAAAACGGCTTTCCGAATACCTCTTCGGCAACGAGG ATTCCCTGGTCCGCATCGATATGTCGGATTATATGGAAAAACACAATGCCTCCCGGCTGGTGGGGGCGCCCCCGGGCTAT GTGGGCTACGAGGAAGGGGGCGCCCTGACCGAGCGCATACGCCGCAACCCCTACCGGGTGGTACTCTTTGACGAAATTGA AAAGGCCCATCACGATGTGTTCAACCTGCTTTTGCAGGTGCTGGAAGAAGGGGAACTCAAGGACCACCTGGGGCATACGG TAAATTTCCGGAACACCGTGATCATCATGACCAGCAATGCCGGGGTGCGGGAGATTTCCCGGGATTCCCAGCTGGGCTTT GCCTCGGAGACCGGGATCATGAGCATTGAGGAGATCCAGAGCGCCGCCCTGGCTGAATTGCGCCGGCTTTTCAACCCGGA ATTTATCAACCGGGTGGATGATGTGGTGGTCTTTCACTCCCTGACAGAGGAACAGGTGGCGGCCATCCTGGACTTGCAGG TAGGGGAACTTTCCCAGCGGCTTGGGGAACAGGGCTACGGAATAGAAGTGCTGCCTGAGGCAAAAAAAATTCTGATTGAA CAGGGCTGGGACCCCAAATACGGGGGCCGTCCCATGCGCCGGGCCATCCAGAAAGAGCTGGAGGACCCCTTGTCACTATT GCTGTTGGAAGGGAACTACCCCTTCGGCTCACTGTTTGTAGCGGATGCTCAGGATGGCAAGATAAGCCTCAGGCCCGCAG CAAAAGCCGGCGGCGGGCAGATGGTAACAGAGGATGTGCTGCCTGTGACCAGGTGA Protein sequence : MSKGLTQRAHRILTIDAQEEARHFNSDQLLPEHVVIALLKEGAGIGCKALMFLRIDLQEFRHTLENEITRMSGLLVYGDV PPSKRTRALLENAAEEARTMGNDYIGTEHILFAAMREQDSPVQLYLNQRAVDTDMLRVVVQTTFSHGSGPEDDFLPPGKM SGAPEGYQSPFLHSRGSGGFPPKPGEEARRSRPDRVKPVNYPPLSATPTLDEYSRDLTALAKLGKLDPVIGRRKEIDRSV RILARRTKNNPVLVGEPGVGKTAIVEGLAQLFSGEDIPEALAGKRILSLDLGSVVAGTKYRGEFEERLKKIMKEIAAARN VILFIDEIHTIIGAGGAEGTIDASNMLKPALSRGDIQCIGATTLGEYRKHFEKDAALERRFQAVQVNEPDTDETLKILKG IQKKYEDHHRVTYTPESVSAAVRLAQRYIIGRFMPDKAIDIMDEAGAMRKLEAGSHPPEVSEIETEIQQLTNEKSALVSV QDYERAAGIRDRVRSLRLRLESLRDAWERSSREERMVVDEGDMRRVVAETTGIPLTRMEEQESRRLLRIEEELHKEVVGQ DEAVKRIASSIRRSRAGISSPKRPMGSFIFLGPTGVGKTLLAKRLSEYLFGNEDSLVRIDMSDYMEKHNASRLVGAPPGY VGYEEGGALTERIRRNPYRVVLFDEIEKAHHDVFNLLLQVLEEGELKDHLGHTVNFRNTVIIMTSNAGVREISRDSQLGF ASETGIMSIEEIQSAALAELRRLFNPEFINRVDDVVVFHSLTEEQVAAILDLQVGELSQRLGEQGYGIEVLPEAKKILIE QGWDPKYGGRPMRRAIQKELEDPLSLLLLEGNYPFGSLFVADAQDGKISLRPAAKAGGGQMVTEDVLPVTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-145 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TREPR_1834 | YP_004531175.1 | negative regulator of genetic competence ClpC/MecB | VFG0079 | Protein | 8e-159 | 56 |
| TREPR_1834 | YP_004531175.1 | negative regulator of genetic competence ClpC/MecB | VFG0080 | Protein | 1e-132 | 46 |
