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Name : nifJ (TREPR_1990) Accession : YP_004531036.1 Strain : Treponema primitia ZAS-2 Genome accession: NC_015578 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 2263640 - 2267203 bp Length : 3564 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGTCCGAAAAACACATGGTTATGATTGATGGTAACACCGCCGCGGGCCAGGTTGCCCACGCGCTAAGCGAAGTAATCGC AATTTATCCGATTACCCCCTCCAGCCCCATGGGCGAAGTCTCCGATGAGCTTTCAGCCCAGGGCAAGAAAAACCTCTGGG GCACTATCCCCCAGGTGGTCGAAATGCAGTCTGAAGCTGGCGCCGCGGGGGCGGTCCACGGGGCCCTGACCTCAGGCGCC CTCTCTTCCACCTTTACCGCGTCCCAGGGATTGCTCTTGATGATCCCCAATATGTACAAGATCGCCGGTGAGCTCACCTC AACGGTGTTCCACATCGCCGCCCGTGCCCTGGCTACCAGTTCCCTCTCGATTTTCGGGGACCACCAGGACGTGATGGCCT GTCGGCAGACCGGCTGGGCCATGCTTTCCTCCAACAGCGTCCAGGAAGCAGCGGATTTGGCGGTCATTTCCCATGCCGCC ACCCTTCGCTCCCGGATACCCTTCCTCCACTTCTTTGACGGTTTCAGAACCAGCCACGAATTGCAGAAGGTCGAGGAAGT GTCCTTTGATACCCTGAAGCAGATGATCGACGACGATCTGGTCCGGGCACACCGGCTGCGGGGGCTGACCCCGGAAAAGC CCTCCATCAGGGGTACCGCCCAAAACCCTGACACCTATTTCCAGGGCCGGGAAGGGGTAAACCAGTACTACAATAAGGTT CCCGCCATAGTTCAAGCGGAAATGGACAAATATGCCAAGATCACCGGTCGTGCCTACCACATTTATGACTACTTCGGGGC CAAGGATGCGGAAAAGGTGATCATTATCATGGGTTCCGGCGCGGAAACCTGCGAAGAAACCGTGGAATACCTGAACAAAA ACGGTGAAAAGGTCGGGGTACTCAAGGTACGGCTCTACCGGCCCTTTGATGCCGCGGCTTTTGTAAAGGCCCTGCCTGCA ACGGTTAAGGCTATTGCGGTTCTGGACCGGACCAAGGAGCCCGGCTCCCTGGGCGAGCCCCTGTACGAAGATGTCCGGAC CGCCATCGGCGAAATTCAGGCTGAGGGAAAGGCCCAGTTCAAGGATTATCCCACCATTCTGGGCGGCCGCTACGGCCTGG GTTCCAAGGAATTCACCCCCGCCATGGTCAAAGCGGTTTTTGATAACCTTTCGGGTAAGAAAATCCCCAAATTCATCGTT GGGATCAATGACGACATCCTGGGCCAGAGCCTGGCCTATGACGAACATTTTGTTTTGGCCGAAGAAGGCATGAACGAAGC CATGTTCTACGGCCTGGGTGCCGACGGCACGGTCGGGGCCAACAAGAACTCCATCAAGATCATCGGGGACGCCAAGCCGG AACTTTCCGCTCAGGCCTACTTCTCCTACGACTCCAAAAAATCCGGGGGCTTCACGGTCTCCCACCTGCGCTTCGGTAAA AGCGCCATCCGCCGCCCCTACCTGATCACCAAGGCGGACTTCCTGGCCTGTCACAAATTCTCCTACATGGAAACCTTCGA CCTCCTGGCCAACATCAAAGACGGCGGCACCTTCCTCCTGAACAGCCCCTATAGCGCCACCGAAGTATGGAAGGAAATCC CTGTGGAAGCCCAGAAGCGGATCATCGACAAAAAGGTCAAGTTTTACGTGATCAACGCCGCAGAAATAGCCCGGAATACC GGCATGGGGAACCGTATCAACACGGTCATGCAGGCCGCCTACTTCAAGCTTTCCGGGGTGCTCCCGGAAGCGGATGCAGT CAAGTATATGAAGAAATTCATCGAAAAATCCTACGGCAAGAAGGGCGCCGACGTGGTCCAGAAAAACTACGCCACCGTGG ATGCCTCGCTCAACGCAGTTCAGGAAGTGAAATACTCCGCTGTAGACGGCAAGCTTCATATGAAACAACCTTTTGCCACA GCCAAGGACCCCTGGATTCAGGATGTGCTGGGCGCCGTGTCCATCCAGGATGGGGACAGGTTGCCGGTAAGCAAAATCCC CGTGGACGGCACCTTCCCCACCGCCACCACTCAGTACGAAAAACGGGCGGTCGCCGAGCGGGTTCCCAGTTGGGACCCCT CGATCTGCGTTCAGTGCGGTACCTGTGCTATAGTGTGTTCCCACGCCTGTATCCGCTTCAAGAACCTTACCGACGCCGAA GCGTCCAAGGCCCCCAAGGGCTTTAAGACTGTGGCGATTAAGCCTAAGCCCGTGGACGGTAAACAGACTGCCCTGGTCAT CTCCGCCGAAGATTGTATGGAATGCGGGGTCTGCATCAACGCCTGCCCTGCCAAATCCAAAGAAGATCCGAACAAGAAGG CCCTAAGCTGGATTAACTATGCGGATAACCCGGAATACCACGCGGAACAAGCCGCAGCCTGGGACTATTTCCTCAGCCTG CCCGAAGTTCCCGCGGAAGAACTCAACCTGTCCACCCCCAAAGGCCTGGCCTACAAGCGGCCCCTCTTTGAATTCTCCGG CGCCTGCGGCGGCTGCGGTGAGACTCCCTATGTGAAGATCCTCTCCCAGCTCTTCGGGGACCGGGCGGTTATCGCCAACG CCACGGGCTGTTCCTCCATCTACGGCGGGAACCTTCCCACCACCCCCTACGCCCAGCGCGCCGACGGCCGGGGCCCCACC TGGTCCAACAGCCTCTTTGAAGACGCCGCAGAATTTGGCTTAGGTATGCGGCTCACCAGCGACAAGCTGGCTGAGTTTGC CAGAGAAGTGGCAGTTGTCGCCAAGGGCGAAGGCCTCCAGACGGGCATCATCGACAAGATCCTGGCAAACCCCCAGAGCA CTGACGCTGAGATCGAAGATCAGCGCAAACTGGTAGACCAGCTCAAGGCAGCCCTGAAAAGCGACACGAAACCGACTGCC AAGCAGCTTGCCTCCCTGGCGGACCACTTCATCAAGCGGTCCGTGTGGATACTGGGCGGCGACGGCTGGGGCTATGACAT CGGCTACGGCGGTCTGGACCACGTCCTGGCCAGCAACCGGAACATCAACGTCCTCTGCATGGATACGGAAGTGTACTCCA ACACCGGCGGTCAGATGTCCAAGGCAACCCCCATAGGGGCCATCGCCAAATTCGCCGCCGCCGGCAAGGACATTACCAAA AAGGACCTGGGAGCCCAGGCTATGAGCTACGGCTATGTATATGTGGCCCGGATCTCCATGGGGGCCAACATAGGCCAGAC CATCAAAGCCTTCCGGGAAGCAGAATCCTACCCCGGGGCCTCCCTGATCCTCGCCTACTCCCACTGCATCAACCACGGCA TCGACATGAGCAAGGGCCTGGAACAGCAGAAAGCAGCGGTTACCTCGGGCCTCTGGCCACTGTACCGCTACGATCCCCGG CTCAAGGGAGAGGGCAAAAACCCCTTCCAGTTGGACTCCAAGGAAGCCACCACCAGCCTGGAAGACTTCATGTACAAGGA AGTCCGCTTCAAGAGCCTCAAGGCTGCCAGCCCCGACCGCGCCGACGCCCTGCTTGCCAAGGCCAAAGCCCAGGCAGAGC GGGTGTGGAAAGAGTACAAGTATTTAGCGGATAGACCATTCTGA Protein sequence : MSEKHMVMIDGNTAAGQVAHALSEVIAIYPITPSSPMGEVSDELSAQGKKNLWGTIPQVVEMQSEAGAAGAVHGALTSGA LSSTFTASQGLLLMIPNMYKIAGELTSTVFHIAARALATSSLSIFGDHQDVMACRQTGWAMLSSNSVQEAADLAVISHAA TLRSRIPFLHFFDGFRTSHELQKVEEVSFDTLKQMIDDDLVRAHRLRGLTPEKPSIRGTAQNPDTYFQGREGVNQYYNKV PAIVQAEMDKYAKITGRAYHIYDYFGAKDAEKVIIIMGSGAETCEETVEYLNKNGEKVGVLKVRLYRPFDAAAFVKALPA TVKAIAVLDRTKEPGSLGEPLYEDVRTAIGEIQAEGKAQFKDYPTILGGRYGLGSKEFTPAMVKAVFDNLSGKKIPKFIV GINDDILGQSLAYDEHFVLAEEGMNEAMFYGLGADGTVGANKNSIKIIGDAKPELSAQAYFSYDSKKSGGFTVSHLRFGK SAIRRPYLITKADFLACHKFSYMETFDLLANIKDGGTFLLNSPYSATEVWKEIPVEAQKRIIDKKVKFYVINAAEIARNT GMGNRINTVMQAAYFKLSGVLPEADAVKYMKKFIEKSYGKKGADVVQKNYATVDASLNAVQEVKYSAVDGKLHMKQPFAT AKDPWIQDVLGAVSIQDGDRLPVSKIPVDGTFPTATTQYEKRAVAERVPSWDPSICVQCGTCAIVCSHACIRFKNLTDAE ASKAPKGFKTVAIKPKPVDGKQTALVISAEDCMECGVCINACPAKSKEDPNKKALSWINYADNPEYHAEQAAAWDYFLSL PEVPAEELNLSTPKGLAYKRPLFEFSGACGGCGETPYVKILSQLFGDRAVIANATGCSSIYGGNLPTTPYAQRADGRGPT WSNSLFEDAAEFGLGMRLTSDKLAEFAREVAVVAKGEGLQTGIIDKILANPQSTDAEIEDQRKLVDQLKAALKSDTKPTA KQLASLADHFIKRSVWILGGDGWGYDIGYGGLDHVLASNRNINVLCMDTEVYSNTGGQMSKATPIGAIAKFAAAGKDITK KDLGAQAMSYGYVYVARISMGANIGQTIKAFREAESYPGASLILAYSHCINHGIDMSKGLEQQKAAVTSGLWPLYRYDPR LKGEGKNPFQLDSKEATTSLEDFMYKEVRFKSLKAASPDRADALLAKAKAQAERVWKEYKYLADRPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 48 |
