Gene Information

Name : TREPR_2176 (TREPR_2176)
Accession : YP_004530879.1
Strain : Treponema primitia ZAS-2
Genome accession: NC_015578
Putative virulence/resistance : Unknown
Product : mutator family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 2053336 - 2054565 bp
Length : 1230 bp
Strand : -
Note : identified by match to protein family HMM PF00872

DNA sequence :
ATGGCCTTTTCAAAAGAAGTCCTGGATGCAATTCTAAAGGACTACCATGGACCCGATGACTTTTATGGGCCCGAAGGGAT
CATGAAACAGCTGACCAAAGCGCTGGTGGAGCGGACGATGGAGGCTTCGAACCTTCGGTTCGCGCTGACCGAGCATCTTG
GGTATGAGAAAAACGGCCAGGGTGAAAAACAAATCTCGAATCGCCGGAATGGCAAAAACACCAAAGAATTAAGAACCGAC
AATGGGCCGATGCCGGTCGAAGTTCCCCGGGATCGGGAGGGAACATTCGAACCCCAAATTGTACCCAAGCACCAGCGGGA
GTTTCGGGGATTTGATGACAAAATCCTTTCGATGTACGCCCTGGGGCTGACCACCCGCCAAATTCAAGATCACCTCAAGG
ATATCTACGCCGTTGACGTCTCGCCTGAGCTTATCAGCCGGGTAACCGATGAGGTTAAGGAACTGGCAGCCGAATGGCGG
GGGCGGGCTCTTGAGCCCTTTTATCCGGTAGTTTTCCTGGATGCGCTGCGGGTCAATATTCGTGATGGGGCTACGGTAGT
CAAGAAATCCGTTTATTTGGCCTTGGCGATACGTTTGGACGGCCATAAAGAACTATTAGGGCTCTGGATTGAGCAAAACG
AAGGGGCCAAGTTTTGGATGGGCATTATGAATGAGCTCAAAAACCGGGGGGTACAAGACATCCTTTTCGCCGCAGTCGAT
GGGCTGACCGGCTTTCCCGACGCCATTGCTGCGGTGTTCCCCAAAACCGAGGTCCAGCTTTGCATCGTCCATATGGTCCG
GAACTCAGTTCGGTTTGTCCCGTACAAAGACCGGAAGGCGGTGACCGCCGCCCTCAAAACTATTTACCTGGCTCCTTCAG
CGGAACTTGCCGCTGAAGCGCTGGAGGAGTTCTCAAAAGTGTGGGATAAAAAATACCCGATGATTTCAAAGTCCTGGCGG
AGCCGGTGGAACGAGGTCATACCATTTTTCAAATTCTCGCCTGAAATCAGGAAGGCGGTGTATACTACCAATGCCATTGA
ATCGGTTAATTACACCATTCAAAAAATTATCAAACACCGCCAGTCTTTCCCGAATGACGAGGCTGCGGTGAAATTAATTT
TCATGGGCTTGAAAAACATTTCCAGAAAATGGACAATGCCTATACGGGATTGGGGCGCTGCACTCAATCAATTCGCAATC
ATTTATGGGGAAGACAGAGTCCCCCTATGA

Protein sequence :
MAFSKEVLDAILKDYHGPDDFYGPEGIMKQLTKALVERTMEASNLRFALTEHLGYEKNGQGEKQISNRRNGKNTKELRTD
NGPMPVEVPRDREGTFEPQIVPKHQREFRGFDDKILSMYALGLTTRQIQDHLKDIYAVDVSPELISRVTDEVKELAAEWR
GRALEPFYPVVFLDALRVNIRDGATVVKKSVYLALAIRLDGHKELLGLWIEQNEGAKFWMGIMNELKNRGVQDILFAAVD
GLTGFPDAIAAVFPKTEVQLCIVHMVRNSVRFVPYKDRKAVTAALKTIYLAPSAELAAEALEEFSKVWDKKYPMISKSWR
SRWNEVIPFFKFSPEIRKAVYTTNAIESVNYTIQKIIKHRQSFPNDEAAVKLIFMGLKNISRKWTMPIRDWGAALNQFAI
IYGEDRVPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-101 51
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 3e-76 44
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 4e-75 43
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 1e-72 43
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 4e-84 42