Gene Information

Name : TREPR_2568 (TREPR_2568)
Accession : YP_004530513.1
Strain : Treponema primitia ZAS-2
Genome accession: NC_015578
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1615757 - 1616656 bp
Length : 900 bp
Strand : +
Note : identified by match to protein family HMM PF00589; match to protein family HMM PF02899

DNA sequence : 
TTGTTGGGGCATTTCAAATCCAGGCTCCTTGCTCTGGAACACCGTTCCCTTCTGACCGCCCAGACCTATTGCTTTGAGGC
GAAGCGTTTTCTGGAATGGCTGGAAACCGCGGGTCTTAAGGTGGAAACCGTGGATTCCCTTTCGATTTCCCGGTACCTTG
AGGAGCGGCGGGAACGGGACGGCATAGATTCCCGTTCCACCGCTAAAGCAATTTCCGCTCTTCGATCCTTCTTCCGGTAT
ATTGGGGATGAAGGATTACGGGATGATAACCCTGCATCCATCCTGGAGCCTCCCCGGAGGAGCAAGCGCCTGCCGGAACT
GCTCTCCCAGGAGGGGGTTGAAAACGTTCTTGCCATGGCGGATCCCGAAAATCCCCGGGGCTTAAGGGACAGGGCGATCT
TTGAGCTTATCTATTCTTCGGGCCTGCGGATTTCCGAAGCGGTTTCCCTGAATATCAGGGATCTGTACTTTCCCGAGGGC
ATTGCCCGGGTTCGGGGAAAGGGCAATAGGGAGCGGCTGGTCCCCTTTGGCGGGGAAGCTGCCCGGTGGCTTAAGCGCTA
TCTGGAGGACGGTCGGCCCAAGTTGGCGAAAAGCAGCCGGAGCCCGGCGCTTTTCCTGGGAAGGACCGGCAAACGGTTTT
CCCGAAAGGGGATATGGAGGAACTACGCAGCCCTGGCGGGTCTTGCGGGGACCAGTTCCAGGGTCCATACCCTGCGGCAT
AGTTTTGCCACGGAACTCCTGGCCGGGGGGGCGGATCTCCGTTCAGTTCAGGAACTTTTGGGGCACGTGGATCTGGCGAC
CACCCAGATTTACACCCATGTTGATATGTCCTTGCTTAAGGATAGTTTGAAACGGTACCGGCCGAAATTGAAAGCTTTAA
GGAGTTCTGATAAAGCATAG

Protein sequence : 
MLGHFKSRLLALEHRSLLTAQTYCFEAKRFLEWLETAGLKVETVDSLSISRYLEERRERDGIDSRSTAKAISALRSFFRY
IGDEGLRDDNPASILEPPRRSKRLPELLSQEGVENVLAMADPENPRGLRDRAIFELIYSSGLRISEAVSLNIRDLYFPEG
IARVRGKGNRERLVPFGGEAARWLKRYLEDGRPKLAKSSRSPALFLGRTGKRFSRKGIWRNYAALAGLAGTSSRVHTLRH
SFATELLAGGADLRSVQELLGHVDLATTQIYTHVDMSLLKDSLKRYRPKLKALRSSDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-42 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-42 44