Gene Information

Name : TREAZ_2302 (TREAZ_2302)
Accession : YP_004525637.1
Strain : Treponema azotonutricium ZAS-9
Genome accession: NC_015577
Putative virulence/resistance : Virulence
Product : alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 42027 - 42722 bp
Length : 696 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
TTGAGCGAAACGGCACAGCTAGTATACATCGTGGAGGATGATCAGGGCATACGGGATCTGACGCTGTATACCCTGAACAA
TTCCGGATTCAAGGCCAAAGGTTTCCCCAACGGAAAAGAATTTTGGAAAGCCCTTGAAGCGGAAAAACCCGGCCTTGTTC
TCCTTGACATTATGCTCCCCGGTGAAGACGGCCTTGCCATTCTAAAACGCCTTCGCAATAATACTGTGACAGTAAAACTA
CCGGTAATGATGCTTACCGCAAAGGGCAGCGAATACGACAAAGTTCTTGGCCTTGATTCCGGTGCAGATGACTACCTTGC
CAAGCCCTTCGGCATGATGGAACTCATTGCCAGGGTAAAGGCCCTGCTCAGGCGCGTGGGTACGGAAAACAGCGGCGATG
AAGAATTCGTCCTGGACGGGCTAAAGATCAATATCCCAAGGCACACCGTTACTGTCAACAATGAAGAAATTATCCTCACC
ATCAAGGAATTTGATCTTCTGGTACACCTTCTTAAAAACAAAGACATGGTACTGTCCAGGGATCAGCTTCTTCAGGAAGT
ATGGGGTTACGAATATGCCGGAGAAACCAGAACCGTGGATGCCCATATACTCACCCTCAGGACCAAACTTAAAGCTAGCG
GCGATCTCATACAAACAGTGCGTGGCCTGGGGTACAAAATCGGGAAAAAAGAATGA

Protein sequence : 
MSETAQLVYIVEDDQGIRDLTLYTLNNSGFKAKGFPNGKEFWKALEAEKPGLVLLDIMLPGEDGLAILKRLRNNTVTVKL
PVMMLTAKGSEYDKVLGLDSGADDYLAKPFGMMELIARVKALLRRVGTENSGDEEFVLDGLKINIPRHTVTVNNEEIILT
IKEFDLLVHLLKNKDMVLSRDQLLQEVWGYEYAGETRTVDAHILTLRTKLKASGDLIQTVRGLGYKIGKKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 1e-30 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-26 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_012469.1.7686381. Protein 3e-41 44
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_003923.1003417.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_013450.8614146.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002951.3238224.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007793.3914065.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002758.1121390.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_010079.5776364.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002952.2859858.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007622.3794948.p0 Protein 5e-32 43
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AE015929.1.gene1106. Protein 5e-27 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002952.2859905.p0 Protein 1e-41 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002758.1121668.p0 Protein 9e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_009641.5332272.p0 Protein 9e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_013450.8614421.p0 Protein 9e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007793.3914279.p0 Protein 9e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007622.3794472.p0 Protein 1e-41 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002745.1124361.p0 Protein 9e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_009782.5559369.p0 Protein 9e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002951.3237708.p0 Protein 9e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_003923.1003749.p0 Protein 6e-42 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001918.1.gene5135. Protein 3e-23 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002695.1.915041.p Protein 3e-23 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000647.1.gene4257. Protein 2e-23 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001138.1.gene4273. Protein 1e-23 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000034.1.gene3834. Protein 3e-23 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0533 Protein 2e-23 42
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_005054.2598277.p0 Protein 3e-32 41
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_014475.1.orf0.gen Protein 3e-32 41
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP DQ212986.1.gene4.p01 Protein 8e-32 41
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP EU250284.1.orf4.gene Protein 5e-34 41
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP004022.1.gene3215. Protein 5e-26 41
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_012469.1.7685629. Protein 4e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1389 Protein 9e-36 45
TREAZ_2302 YP_004525637.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG0596 Protein 1e-26 42