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Name : TREAZ_2426 (TREAZ_2426) Accession : YP_004528992.1 Strain : Treponema azotonutricium ZAS-9 Genome accession: NC_015577 Putative virulence/resistance : Unknown Product : putative type-1 restriction enzyme MjaXP R protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 3769495 - 3772776 bp Length : 3282 bp Strand : + Note : identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348 DNA sequence : ATGCCCTTCCTCACCGAGTCTGATATTGAACAATACGCCCTCGAACTTCTCGAAGCCCAGGGCTATGACTGTCTGTACGG CCCGGACATTGCGCCGGGCGGGCATAATCCGCTCCGTAAATCTTTTGATGAGGTTCTCCTCTTTGATATGCTGGAAGCCG CTGTTGCCCGGATTAACCCGAACCTTTCACGGGAGCTTCGGGAGGATGCGGTCAGGCAGTTGGCCCGGCTCCGCAGTGCG GATCTTATGGTCAACAACGAAACCTTTCACCGCTTCTTCACCGAGGGGGTTCCTGTAACCAGTGTTTCAGGCGGTTATGA GCGGGGAGACAGGGTGATGCTGGTTGACTTTGAACATCCTGAGACTAACGATTTTACAGCGGTCAACCAGTTTACGATTA TCGAGAATCATATCAATAAACGGCCCGACATCATCCTCTTTATAAACGGGATTCCCCTGGTGGTAATCGAATTAAAAAAC GCCGCCGATGAAAACGCGGATATTGCATCAGCCTGGAAGCAGATACAAACGTACAAAGAGGCGATTCCCTCCCTTTTTAC CTTTAACAGTTTTGCAATTATCTCTGACGGCCTTGAGGCGCGGGCGGGAACCATTTCTTCGGGGCAGAGCCGCTTTATGG CCTGGAAAAGCGCCGATGGCAGGAAAGATGCGTCCGGGCATACGGGGCAGATCGAGACCCTTATTAAGGGGATGCTGAAT ACGCAAACCCTGCCGGATCTTATCCGCCACTTTATTGTGTTTGAAAAAACCAGACGGGAAGACAGTAAAGGAATTACCGC CGTCGAGACGGTTAAAAAACTTGCGGCCTATCATCAATACTACGCGGTGAACAAGGCGGTGGAATCTACCCTGCGGGCAT CGGGGTATGTAAAAAAGTCAAAGGGGATACACAAGGGGATTGGCGCAGAATCGGAGAATGCCGCTGCCGAAGATCCTGAA TCCTACGGACTGCCCGGTGTAAAAACCCAGCCCCTGCGGGACCGGAAGGGCGGCGTTATCTGGCATACCCAGGGCTCGGG GAAGTCCCTGTCCATGGTGTTCTTTACGGGCAAGATCATCCTTGCCATGGATAACCCTACCGTGGTGGTGATCACCGACC GGAATGATCTGGACGATCAGCTTTTTGACACTTTTAGTGCTTCAAAACAACTGCTCCGTCAGGAACCGGTTCAGGCGGAG AGCCGAGGCCAGCTCAAGGAACTTCTCAAGGTTGTTTCAGGTGGCGTGGTGTTTACTACCATTCAGAAATTTCAGCCCGA GGACGGCAGTAATCTGTACGAAGAACTGTCGAAGCGGGAAAATATCATCGTTATTGCCGACGAAGCCCACCGGAGTCAGT ACGGGTTTACTGCAAAAACGCTGGACGAAAAAAACGAAGCCGGGGAAGTGATCGGCAAAAAGACGGTGTACGGTTTTGCC AAATATCTGCGGGACGCCCTGCCCAACGCGACGTATCTGGGCTTTACCGGCACCCCCATCGAAAGCGCCGATGTGAACAC CCCTGCGGTCTTTGGCAATTATGTGGATATCTACGATATTGCCCAGGCGGTGGAAGACGGCGCCACAGTCCGCATCTATT ACGAAACCCGTCTGGCGAAAATTTCATTGAGCGATGAAGGCAAAAGGCTCATTCAGGAATTTGACGATGACCTTGAAATG ACTGAACTCGCGGAGACCCAAAAGGCTCAGGCGAAATGGGCCCAGCTTGAAGCCCTTGTCGGAAGCTCCGGCAGGATAAA AAAAATAGCCCTGGATATTGTTACCCATTTTGAACAGCGCCAAACGGTATTAAACGGCAAGGCCATGATTGTCGCCATGT CACGCCGTATTGCCGCCGCCCTGTATGAGGAAATTACCGTCCTGAGGCCCGAATGGCACAACAGCGATTTGGATAAGGGA AGTATCAAAGTGGTGATGACATCTTCTTCTTCCGATGGGCCTGAAATATCCAAACATCATACTACCAAGGATCAACGCCG CAAACTTTCTGACCGGATGAAAAATCCCCATGACGAACTCCGTCTGGTGATCGTTCGGGATATGTGGCTCACCGGGTTTG ATGTGCCCGCTCTCCATACCCTCTATATTGATAAGCCCATGCGGGGCCATAACCTGATGCAGGCCATAGCCCGAGTCAAC CGGGTATATCTGGATAAAAAGGGCGGCCTCATCGTGGATTATCTGGGGATCGCTTCGGATCTAAAAGATGCCCTTTCCTT TTATTCCGCCTCAGGGGGCAGGGGCGATCCGGCGGAAACCCAGGAGCAGGCGGTTTCCCTCATGCTGGAAAAACTGGAAG TGGTGTCTCAGCTGTTCCACGGTTTCGATTATTCCCCCTACTTTAGTGCCGGTACGGGGCAGAAGCTTTCCCTCATTCTT GCTGCGGAGGAACATATCTTGCAGCAGGAAGACGGACGACGGCGTTTTCTCGATCAGGTAACTGCCCTGTCCCAGGCCTT CGCTATTGCGGTTCCCCATGACAAGGCCATGGATGTAAAGGATGAAGTCGCCTTCTTCCAGGCGGTAAAGGCCCGGCTTG CAAAATTTGACGGGCCCGCTTCCGACGAAACCGTTTCCGGTAAATCCTCAGGCGCCTCCGCGCAGACAGCCTCCTCCCTG GAAACCGCCATCCGCCAGATCGTTGACCAGGCCCTGGTAACAAGCCGGGTGATCGATGTGTATGAAGCGGCGGGAATCAA GAAGCCCGATATTTCGATCCTTTCGGAAGAATTCCTTATGGACGTAAAAAACATGGAGCACAAGCACCTCGCCATGGAAG TGCTGCGAAAACTCCTTGCCGATGAAATCAGGGCCCGGCTTAAAACAAACCTGGTGGAAGGGAAGACCCTGATGGAAATG CTGGAAAATTCCATCAAAAATTATCAGAATAAAATCGTCACCGCTGCGGAAGTCATCGACGAGCTTATATCCCTTGCCAG GGATATTCATAAACGGGATACGGCTTTTGAGGAACTTAAGCTTACCGAATACGAATATGCTTTTTATACCGCAGTGGCGA ATAACGAAAGCGCCCGCGAATTAATGGGCAAGGAACAGCTCCGGGAATTGGCAGTGGTACTCTACCGGAAAGTAAAAGAG AACGCCTCCATCGACTGGACTATACGCGAAGATGTGCGGGCCAAGCTCAAGGTGACGGTGAAACGCCTTCTCCGCGAATA CGGCTATCCCCCGGACATGGAAGCCCTGGCAACCGAAACGGTTTTGCAGCAGGCGGAAAAAATCGCCGATGAGCTGGCGT AA Protein sequence : MPFLTESDIEQYALELLEAQGYDCLYGPDIAPGGHNPLRKSFDEVLLFDMLEAAVARINPNLSRELREDAVRQLARLRSA DLMVNNETFHRFFTEGVPVTSVSGGYERGDRVMLVDFEHPETNDFTAVNQFTIIENHINKRPDIILFINGIPLVVIELKN AADENADIASAWKQIQTYKEAIPSLFTFNSFAIISDGLEARAGTISSGQSRFMAWKSADGRKDASGHTGQIETLIKGMLN TQTLPDLIRHFIVFEKTRREDSKGITAVETVKKLAAYHQYYAVNKAVESTLRASGYVKKSKGIHKGIGAESENAAAEDPE SYGLPGVKTQPLRDRKGGVIWHTQGSGKSLSMVFFTGKIILAMDNPTVVVITDRNDLDDQLFDTFSASKQLLRQEPVQAE SRGQLKELLKVVSGGVVFTTIQKFQPEDGSNLYEELSKRENIIVIADEAHRSQYGFTAKTLDEKNEAGEVIGKKTVYGFA KYLRDALPNATYLGFTGTPIESADVNTPAVFGNYVDIYDIAQAVEDGATVRIYYETRLAKISLSDEGKRLIQEFDDDLEM TELAETQKAQAKWAQLEALVGSSGRIKKIALDIVTHFEQRQTVLNGKAMIVAMSRRIAAALYEEITVLRPEWHNSDLDKG SIKVVMTSSSSDGPEISKHHTTKDQRRKLSDRMKNPHDELRLVIVRDMWLTGFDVPALHTLYIDKPMRGHNLMQAIARVN RVYLDKKGGLIVDYLGIASDLKDALSFYSASGGRGDPAETQEQAVSLMLEKLEVVSQLFHGFDYSPYFSAGTGQKLSLIL AAEEHILQQEDGRRRFLDQVTALSQAFAIAVPHDKAMDVKDEVAFFQAVKARLAKFDGPASDETVSGKSSGASAQTASSL ETAIRQIVDQALVTSRVIDVYEAAGIKKPDISILSEEFLMDVKNMEHKHLAMEVLRKLLADEIRARLKTNLVEGKTLMEM LENSIKNYQNKIVTAAEVIDELISLARDIHKRDTAFEELKLTEYEYAFYTAVANNESARELMGKEQLRELAVVLYRKVKE NASIDWTIREDVRAKLKVTVKRLLREYGYPPDMEALATETVLQQAEKIADELA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 44 |
