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Name : TREAZ_2435 (TREAZ_2435) Accession : YP_004528983.1 Strain : Treponema azotonutricium ZAS-9 Genome accession: NC_015577 Putative virulence/resistance : Unknown Product : type I restriction-modification system, M subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 3763472 - 3765076 bp Length : 1605 bp Strand : + Note : identified by match to protein family HMM PF02384 DNA sequence : ATGGCAAAACAAAAGAATATCTCCGCGAAGCCCCCCGCCTCCGCAGAACCGATAGAAAAACAACTCTGGAAAGCCGCAGA CAAACTGCGGAAAAACATCGACGCCGCAGAATACAAGCACATCGTCCTGGGCCTCATCTTCCTCAAGTACATCTCCGACG CCTTCGAGGAACTCCACGAAAAATTGACCTCCGGAAAAGGCGAATACAAAGGCGCCGACCCCGAAGACCGGGACGAGTAC CTGGCGGAAAATATTTTCTTTGTCCCCGAAAACGCCCGCTGGACCCGTATCCGTTCACGGGCAAAACAGGTTTCCATAGG CAAAGATATCGACGCCGCCATGGACGCCATCGAAAAAGACAACCCCTCGTTAAAGGACGTACTCCCCAAAGTCTACGCCC GGGGCAACCTCGACCCCGTGAACCTCGGCGCCCTGGTAGACCTTGTCAGCAACACCGCCCTGGGAACAGCCGAGGCCCGG AGCGCCGACCTTCTGGGCCACGTGTTTGAATATTTTCTCGGAGAGTTCGCCCTCGCAGAAGGCAAGAAAGGCGGCCAGTT CTACACCCCCCGAAGCGTAGTAGAACTGTTAGTCTCCATGCTGGAACCCTACAAAGGCCGGGTCTTTGACCCCTGCTGCG GTTCCGGCGGCATGTTTGTCCAGTCCGAAAAATTTGTAGCCAACCACCGGGGCCGCCTCAAGGACATTTCGATATACGGC CAGGAAAGCAACCACACCACCTGGCGCCTTGCCAAAATGAACCTCGCCATCCGGGGAATCGAAAGCTCCCAGGTATCGTG GAACAACGAAGGCTCCTTTCTCAAAGACGCCCACCGTGACCTCAAGGCCGATTTCGTCATCGCCAATCCCCCTTTTAACG ACAGCGACTGGTCCGGGGAACTCCTCCGCACCGACGCCCGCTGGCAGTACGGAACCCCGCCCGCAGGAAACGCCAACTAC GCCTGGATACAACACTTCCTCTACCACCTGGCCCCCAAAGGAACTGCCGGCTTCGTCCTTGCCAAAGGCTCCCTCACCTC AAAGAGCTCAGGCGAAGGCGACATCCGCAAAGCCCTCATCGAAGCGCAGCTCGTAGACTGCATCGTCAACCTCCCGGCCA AACTCTTTCTCAACACCCAAATCCCCGCCTGCCTCTGGTTCCTCTCCCGCAGCAAAGCCCGAGGCCCCCGCTCCGCCGAA ATCCTCTTTATCGACGCCCGCAGCCTCGGCCGCCTCATCAACCGCCGCACCCGCGAACTCGCCCCCGAAGACATCGCGCA AATTGCCGAAACCTATCACCACTGGCGCAGCGCGAACCCCTCCTACCAAGACATCAAAGGCTTTTGCTCCTCCGCCCTCA TAGACCGCGTCAGAGACCTTGATCACGTCCTTACCCCCGGCCGCTACGTCGGCCTCCCCGACGAAGAAGACGACTTTGAC TTTGCCACCCGCTTCACCAGCCTTAAAGCCGAGTTCGAAGCCCAGCTCAAAGAAGAAGCGCGTCTTAACAAGCAGATACT GGAAAACCTCAAGAAAATAAATCCCGAACCCAAAAAAGGAACCGCCAACGCGGCCCCTAAAAATAGAAGTTTAAAGGAAA ACTAA Protein sequence : MAKQKNISAKPPASAEPIEKQLWKAADKLRKNIDAAEYKHIVLGLIFLKYISDAFEELHEKLTSGKGEYKGADPEDRDEY LAENIFFVPENARWTRIRSRAKQVSIGKDIDAAMDAIEKDNPSLKDVLPKVYARGNLDPVNLGALVDLVSNTALGTAEAR SADLLGHVFEYFLGEFALAEGKKGGQFYTPRSVVELLVSMLEPYKGRVFDPCCGSGGMFVQSEKFVANHRGRLKDISIYG QESNHTTWRLAKMNLAIRGIESSQVSWNNEGSFLKDAHRDLKADFVIANPPFNDSDWSGELLRTDARWQYGTPPAGNANY AWIQHFLYHLAPKGTAGFVLAKGSLTSKSSGEGDIRKALIEAQLVDCIVNLPAKLFLNTQIPACLWFLSRSKARGPRSAE ILFIDARSLGRLINRRTRELAPEDIAQIAETYHHWRSANPSYQDIKGFCSSALIDRVRDLDHVLTPGRYVGLPDEEDDFD FATRFTSLKAEFEAQLKEEARLNKQILENLKKINPEPKKGTANAAPKNRSLKEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 4e-137 | 56 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 8e-137 | 56 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-137 | 56 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-115 | 46 |
