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Name : clpA (TREAZ_0240) Accession : YP_004527586.1 Strain : Treponema azotonutricium ZAS-9 Genome accession: NC_015577 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2237694 - 2240084 bp Length : 2391 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639 DNA sequence : ATGAAAATTTCGGATCATGTGCAGGCCATTATCAATGCGGCCTATAACGAAGCCAAGGCGAGGAACCACGAGTACCTTAC CCCGGAGCATATACTTTACGCGGCCCTGAATTTCGACGAAGTCCAGGGCATATTGACTGCCTGCGGCGCAGACTTGATGA TGCTCCGAAACGGCATGGAGAGCTTTTTTGAACAGAAAATTCCTGTTGTGGGAGGCGGAGACCCCATCCAGACCGCCAAT TTTCAGAGTGTCATCGAGAGGGCGGTACTTTCCTATCAATCTGCCCAAAAGGATATGCTTGAGGTATCCGACATACTCGT ATCCCTCTACGACGAGGACAGAAACTATTGCGCCTATTATCTCCGCCAGGCGGGGGTGGATCGTTTCGACCTGCTTAACA TCCTCTCCCATGGCTTCGAATCCGGGGAGCGGGGGCCGGGACTTCGGGGCTTTACCAAGTCCGGGGCTTCTCCCAGGAAC GAGGAAGATCCCAACAGGGACAACCTCCTGGACGACGAAATACCGGAAGCGGGCCCCAAATCCAAGGCTGCCAAGAAAAG CGCCCTTGAGAGATTCGCCACAGAGCTTACTGCCCTGGCCAGGGAAAACCGGCTTGAACCGGTCATTGGCAGGGAATTGG AACTGGACCGCACGGTGCAGGTGCTTTGCAGGCGGCTCAAGAACAATCCTGTCCATGTAGGCGATTCGGGTGTGGGCAAA ACCGCCATCACCGAGGGGCTGGCCCAGCGCATAGTGGCGGGCAAAGTCCCCCCTACCCTGAAGGATTTTACCATCTATTC CCTGGACATGGGCGCACTTGTGGCAGGCACTAAGTACCGGGGCGACTTTGAAGAGCGGATCAAGAGGGTTGTGGAAGAAA TACTCAAAAAAGAAAAAGCCATACTTTTCATAGACGAGATCCATACCCTGGTGGGGGCGGGATCGGTTTCGGGCAGTGCG CTGGACGCTTCCAACCTGCTTAAGCCTGCCCTAAGCTCCGGGAAGATACGCTGCATAGGTTCCACCACTCACGAGGAATA CAGCAAATTCTTCGACAAGGACAGGGCGCTTTCGCGGCGTTTCCAGAAAATCGACATCAATGAACCAAGCGAAGTTGACG CCATCAAGATCCTGCAGGGGCTTAAATCAAAATACGAGGATTACCACAAGGTCCACTATACCGATGAAGCCGTGGAAGGG GCGGTGCGCCTCTCTGCCCAATACATCACCGAACGCCGCCTGCCGGACAAGGCTATAGATGTCATCGACGAGGCCGGCGC CTTTGCCCGTATCGAGGCGTATAAAAAGGAATCCGCCGGCCAGAATGCCGAAGAGCCTGCGGTAACGGAACATTCCATTC AGGAAGCTTCCACATCAGTAGGCACTATAGACATAGGGCTCCCCCTTATCGAGACAGTGATTTCCAAAATCGCCCGCATC CCGGAACGCTCGGTTGGGGGCAGGGAGAAGGATAAACTCAGGGAGCTGGAAGAAAAGCTCCGCACCAGGATCTTTGGGCA GGACGAGGCTGTTACCGCGGTGGTCAAGGCTGTAAAGCGGTCGAGGGCCGGCTTTAGGGATGCCAATAAACCGGTGGCCA ACTTCCTCTTTGTGGGGCCTACGGGGGTCGGCAAAACAGAGCTTGCCCGGAGCCTTGCGGATATCATGGGCGTATCCATG CATCGCTTCGATATGAGCGAGTACCAGGAGAAGCACACGGTTTCCCGCCTCATAGGATCGCCCCCCGGTTATGTGGGTTA TGAAGAAGGCGGCCTCCTTACCGATGCCATACGCAAGCAGCCCCACAGTGTGGTGCTCCTGGACGAGATTGAAAAAGCCC ACCCGGATATTTACAACATACTCCTCCAGATCATGGATTATGCTACCCTCACGGACAACAACGGCAGGAAGGCCGACTTC CGCAATGTGGTGCTTATCATGACCAGCAATGCAGGCGCCAGGGACATCGGCAAAAACCTCATCGGCTTTGGCGAGCGCGT CATGGACGAGAGCGCCGTGGACGGAGCTGTGGAAAAAATATTCACCCCGGAATTCCGCAACCGCCTTGACGCCGTGGTGC GCTTCGGGCATCTCTCAAAAGAAATCATGGCGTCCATTGTGACCAAGGAGCTTGAAAACTTTAAGGGACAGCTGGCCGAA AAGAAAGTGCATCTTCACGTGAGCGAAGCCTGCATTGCCCAGCTGGCTGAAGAAGGCTATTCCCGGGAATTCGGCGCCCG CAATGTGGGCAGGGTGGTGGAAGAAAAGATCAAAGCCTTTTTTGTGGACGAGGTCCTCTTTGGCCGCTTGAGCGAGGGCG GCGCAGCGCGAGCCGATTATGCCGACGGTGAATTCAAGATCGAAATACTGGAAAACGAGCCAGTCGCCTAA Protein sequence : MKISDHVQAIINAAYNEAKARNHEYLTPEHILYAALNFDEVQGILTACGADLMMLRNGMESFFEQKIPVVGGGDPIQTAN FQSVIERAVLSYQSAQKDMLEVSDILVSLYDEDRNYCAYYLRQAGVDRFDLLNILSHGFESGERGPGLRGFTKSGASPRN EEDPNRDNLLDDEIPEAGPKSKAAKKSALERFATELTALARENRLEPVIGRELELDRTVQVLCRRLKNNPVHVGDSGVGK TAITEGLAQRIVAGKVPPTLKDFTIYSLDMGALVAGTKYRGDFEERIKRVVEEILKKEKAILFIDEIHTLVGAGSVSGSA LDASNLLKPALSSGKIRCIGSTTHEEYSKFFDKDRALSRRFQKIDINEPSEVDAIKILQGLKSKYEDYHKVHYTDEAVEG AVRLSAQYITERRLPDKAIDVIDEAGAFARIEAYKKESAGQNAEEPAVTEHSIQEASTSVGTIDIGLPLIETVISKIARI PERSVGGREKDKLRELEEKLRTRIFGQDEAVTAVVKAVKRSRAGFRDANKPVANFLFVGPTGVGKTELARSLADIMGVSM HRFDMSEYQEKHTVSRLIGSPPGYVGYEEGGLLTDAIRKQPHSVVLLDEIEKAHPDIYNILLQIMDYATLTDNNGRKADF RNVVLIMTSNAGARDIGKNLIGFGERVMDESAVDGAVEKIFTPEFRNRLDAVVRFGHLSKEIMASIVTKELENFKGQLAE KKVHLHVSEACIAQLAEEGYSREFGARNVGRVVEEKIKAFFVDEVLFGRLSEGGAARADYADGEFKIEILENEPVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-119 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_004527586.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0080 | Protein | 5e-116 | 44 |
| clpA | YP_004527586.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0079 | Protein | 9e-130 | 44 |
