Gene Information

Name : TREAZ_0901 (TREAZ_0901)
Accession : YP_004526969.1
Strain : Treponema azotonutricium ZAS-9
Genome accession: NC_015577
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1559345 - 1560277 bp
Length : 933 bp
Strand : +
Note : identified by match to protein family HMM PF00589; match to protein family HMM PF02899

DNA sequence :
ATGGATAAGCATGCCCTGCTGGAAAGCTACTATTCCCGGCTCATTGCCCTTGAACGCCGGGCCCCTCTCACCGCCGAAAC
CTATCGTTTCGAGATACGCCGTTTCCTCGACTGGGCGGAGAAAGAGAAGCTTTCGGTAGAGGATGCTGAATCCGCCATGG
GAAAACCTTTGGAGTTTCCCGATGTAAACCGTTATCTGGATCACCGCCGCGCGGACGACGGCATAGATTCAAGATCGGTG
GCAAAGGCAATTTCGGCACTGCGTTCTTTTTTTCGCTTCCTTGTGGATGAGAGAATCAGGAACGACAACTGCATTTCCCT
TTTGGAGCTTCCCCACAAGAAAATGCGGCTTCCGGCGGTGCTGAAGAAGGGCGAAGCGGACAAGCTTCTGAGCCTTATTG
ACATCAGTACCCCCCTGGGTTTGCGGAACAGGGCGCTCTATGGACTCATCTATTCCGCAGGGCTTCGAATTTCTGAAGCG
GTTTCCCTTAATATCCAGGATCTTGTTCTTGCCGAAGGGCTTGCACGGGTAAGGGGCAAAGGCGATAAAGAAAGGCTCGT
GGTATATGGCCCGGATTCAATAATGTGGCTCAGGCGTTATATTGAAGAAGTAAGGCCGCTGCTTTTAAAACAGCGCCACA
GCTCCGCGCTTTTTGTAAGCGCCAGGGGAAAGAGGCTTTCGCGGAAAGGAATCTGGAAAAATTATGTTGCCCTGGCTGAG
CAGGCAGGGATCAGCACCAAGCTCCATACCCTAAGGCACACTTTTGCTACTGAACTTCTCTCCGGCGGCGCCGATCTCCG
CTCGGTGCAGGAACTCCTGGGCCATGCTGATTTATCCACCACCCAGATCTATACCCATGTGGACGTTTCCCTCCTCAGGG
AAAGCCACCGCCGATTTCTTCCTAAACTAAAGGAATTGGGACATGAAAATTAA

Protein sequence :
MDKHALLESYYSRLIALERRAPLTAETYRFEIRRFLDWAEKEKLSVEDAESAMGKPLEFPDVNRYLDHRRADDGIDSRSV
AKAISALRSFFRFLVDERIRNDNCISLLELPHKKMRLPAVLKKGEADKLLSLIDISTPLGLRNRALYGLIYSAGLRISEA
VSLNIQDLVLAEGLARVRGKGDKERLVVYGPDSIMWLRRYIEEVRPLLLKQRHSSALFVSARGKRLSRKGIWKNYVALAE
QAGISTKLHTLRHTFATELLSGGADLRSVQELLGHADLSTTQIYTHVDVSLLRESHRRFLPKLKELGHEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-40 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-40 43